In a 66-year-old woman with an otherwise normal complete blood count, could Plaquenil (hydroxychloroquine) or methotrexate cause lymphopenia?

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Last updated: April 23, 2026 • View editorial policy

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Yes, both methotrexate and Plaquenil (hydroxychloroquine) can cause lymphopenia, but methotrexate is the more likely culprit.

Methotrexate and Lymphopenia

Methotrexate is well-documented to cause lymphopenia and has a cell-type specific effect on lymphocytes. The FDA label explicitly lists leukopenia, neutropenia, and lymphopenia as known hematologic adverse reactions 1. More specifically, methotrexate preferentially reduces B-lymphocytes and T-lymphocytes while sparing natural killer cells 2.

The mechanism is dose-dependent suppression of hematopoiesis, which can manifest as:

  • Anemia
  • Aplastic anemia
  • Pancytopenia
  • Leukopenia
  • Neutropenia
  • Thrombocytopenia 1

In controlled clinical trials for rheumatoid arthritis, leukopenia (WBC <3000/mm³) occurred in 2 out of 128 patients, and pancytopenia occurred in 2 patients 1. The FDA label emphasizes that methotrexate should be stopped immediately if there is a significant drop in blood counts 1.

Hydroxychloroquine and Lymphopenia

Hydroxychloroquine can also cause lymphopenia, though this appears less common and less well-characterized than with methotrexate. The FDA label lists "leukopenia" under blood and lymphatic system disorders as a post-approval adverse reaction 3. However, a 2024 retrospective study of 289 patients found that severe laboratory abnormalities (including lymphopenia) while taking hydroxychloroquine were rare, and when they occurred, 70% were likely due to disease progression or other medications rather than hydroxychloroquine itself 4.

Clinical Approach in Your Patient

For a 66-year-old woman with an otherwise normal CBC except for low lymphocytes:

First, determine the degree of lymphopenia:

  • Mild: 1000-1500 cells/μL
  • Moderate: 500-1000 cells/μL
  • Severe: <500 cells/μL

If on methotrexate: This is the more likely cause. Consider:

  • Immediate repeat CBC to confirm the finding
  • If persistent and significant, hold methotrexate temporarily
  • Rule out infection (patients are at risk for opportunistic infections when CD4+ counts drop critically low 5)
  • Consider folate supplementation, which may reduce certain toxicities in chronic use 1
  • Evaluate renal function, as elderly patients have increased risk of bone marrow suppression 1

If on hydroxychloroquine alone: Less likely to be the primary cause. Investigate:

  • Disease activity (underlying rheumatologic condition may cause lymphopenia)
  • Other medications
  • Other causes of lymphopenia (viral infections, autoimmune conditions, nutritional deficiencies)

If on both medications: Methotrexate is still the more likely culprit, but the combination may have additive effects on bone marrow suppression 6.

Key Monitoring Recommendations

  • For methotrexate: CBC monitoring is essential and should be performed regularly, especially in elderly patients who have increased risk of bone marrow suppression, thrombocytopenia, and other hematologic toxicity 1

  • For hydroxychloroquine: CBC and CMP monitoring should be at the prescribing physician's discretion, as severe abnormalities are rare 4

The critical threshold is CD4+ lymphocyte counts—when critically low (similar to HIV infection), patients become predisposed to opportunistic infections regardless of the cause 5. If lymphopenia is severe (<500 cells/μL), consider lymphocyte subset analysis to assess CD4+ counts specifically.

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.