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Last updated: July 13, 2025View editorial policy

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Differential Diagnosis for Green Mushy Stool

  • Single most likely diagnosis
    • Giardiasis: This is a common cause of green, mushy stools, especially if the patient has not consumed green leafy vegetables. Giardia lamblia infection can lead to malabsorption and altered stool color.
  • Other Likely diagnoses
    • Bile salt malabsorption: Conditions like bile duct obstruction or liver disease can lead to an excess of bile salts in the stool, causing a greenish color.
    • Small intestine bacterial overgrowth (SIBO): An overgrowth of bacteria in the small intestine can lead to malabsorption and production of green, mushy stools.
    • Viral gastroenteritis: Certain viral infections can cause changes in stool color and consistency, including a green, mushy appearance.
  • Do Not Miss (ddxs that may not be likely, but would be deadly if missed.)
    • Intussusception: Although rare in adults, intussusception can cause green, bloody stools and is a medical emergency.
    • Gastrointestinal malignancy: Certain types of cancer, such as gastric or small intestine cancer, can cause changes in stool color and consistency.
    • Inflammatory bowel disease (IBD): Conditions like Crohn's disease or ulcerative colitis can cause green, bloody stools and require prompt medical attention.
  • Rare diagnoses
    • Pseudomembranous colitis: A rare condition caused by Clostridioides difficile infection, which can lead to green, watery stools.
    • Congenital disorders of bile acid synthesis: Rare genetic disorders that affect bile acid production, leading to green, mushy stools.
    • Whipple's disease: A rare, systemic bacterial infection that can cause malabsorption and changes in stool color and consistency.

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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