What are the common bacteria and viruses present in sinusitis?

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Common Bacteria and Viruses in Sinusitis

In sinusitis, the most common bacterial pathogens are Streptococcus pneumoniae, Haemophilus influenzae, and Moraxella catarrhalis in acute cases, while Staphylococcus aureus and anaerobic bacteria predominate in chronic sinusitis. 1

Acute Sinusitis Pathogens

Bacterial Causes

  • Primary bacterial pathogens:
    • Streptococcus pneumoniae (responsible for >50% of cases in adults) 1
    • Haemophilus influenzae (non-typeable) 1
    • Moraxella catarrhalis (especially common in children) 1

Viral Causes

  • Viral infections frequently precede bacterial sinusitis, with viruses found in approximately 15% of sinus aspirates 1
  • Common viral pathogens include:
    • Rhinovirus
    • Influenza virus
    • Parainfluenza virus
    • Adenovirus 1, 2

Chronic Sinusitis Pathogens

Bacterial Causes

  • Primary bacterial pathogens:
    • Staphylococcus aureus (10% of cases) 1
    • Anaerobic bacteria:
      • Prevotella species (31%)
      • Anaerobic streptococci (22%)
      • Fusobacterium species (16%)
      • Peptostreptococcus species 1, 3
    • Aerobic bacteria:
      • Streptococcus species (21%)
      • Haemophilus influenzae (16%)
      • Pseudomonas aeruginosa (16%)
      • Moraxella catarrhalis (10%) 1

Fungal Causes

  • Fungi are increasingly recognized in chronic sinusitis, particularly in immunocompromised patients and in the southeastern and southwestern United States 1
  • Common fungal pathogens:
    • Aspergillus species
    • Mucor
    • Pseudallescheria boydii (Scedosporium) 1

Special Clinical Scenarios

Nosocomial Sinusitis

  • Gram-negative bacilli (Pseudomonas aeruginosa, Klebsiella pneumoniae, Enterobacter species)
  • Staphylococcus aureus (including MRSA strains) 1, 3

Immunocompromised Patients

  • Pseudomonas aeruginosa
  • Fungi (invasive fungal sinusitis) 2

Important Clinical Considerations

  • Diagnostic challenges: The precise microbial etiology of sinusitis can only be determined by direct aspiration of the sinus, as nasopharyngeal cultures correlate poorly with actual sinus pathogens 1

  • Antimicrobial resistance: Many bacteria in sinusitis have developed resistance mechanisms:

    • Beta-lactamase production in H. influenzae, M. catarrhalis, S. aureus, and anaerobes
    • Penicillin-binding protein alterations in S. pneumoniae 4
  • Biofilm formation: Chronic rhinosinusitis often involves biofilm formation, which contributes to persistence of infection and treatment resistance 3

  • Treatment implications: Empiric antibiotic selection should target the most likely pathogens based on whether the infection is acute or chronic 1

Understanding the microbiology of sinusitis is essential for appropriate treatment selection, especially given the increasing prevalence of antimicrobial resistance among common respiratory pathogens.

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Microbiology of sinusitis.

Proceedings of the American Thoracic Society, 2011

Research

Microbiology of chronic rhinosinusitis.

European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2016

Research

Microbiology and management of sinusitis.

The Journal of otolaryngology, 1996

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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