Workup for Small Intestinal Bacterial Overgrowth (SIBO)
The diagnostic workup for SIBO should include hydrogen-based breath testing with glucose or lactulose as the primary diagnostic tool, or small bowel aspirates when available, followed by appropriate laboratory tests to identify nutritional deficiencies and underlying causes. 1
Clinical Evaluation
Key Symptoms to Assess
- Abdominal bloating and distention
- Diarrhea and steatorrhea
- Abdominal pain
- Flatulence
- Nausea
- Weight loss
- Malnutrition signs
Risk Factor Assessment
- History of intestinal motility disorders
- Previous abdominal surgeries (especially those affecting the ileocecal valve)
- Anatomical abnormalities (strictures, fistulas, diverticula)
- Conditions associated with hypochlorhydria (PPI use, atrophic gastritis)
- Systemic diseases (diabetes, scleroderma, Parkinson's disease)
- Immunodeficiency states
Diagnostic Testing
First-Line Testing
Breath Testing:
Small Bowel Aspirate Culture (when available):
Laboratory Tests to Identify Complications and Nutritional Deficiencies
- Complete blood count (CBC) - to assess for anemia
- Comprehensive metabolic panel
- Vitamin B12 levels
- Fat-soluble vitamins (A, D, E, K)
- Serum iron, folate
- Magnesium levels
Imaging and Additional Testing (when indicated)
- Abdominal X-ray (KUB) - to exclude intestinal obstruction or severe constipation 1
- Abdominal ultrasound - to identify structural abnormalities
- CT/MRI - if structural abnormalities are suspected 1
Differential Diagnosis Workup
For patients with overlapping symptoms, consider testing for:
Carbohydrate Malabsorption:
- Lactose breath test
- Fructose breath test
Motility Disorders:
- Gastric emptying studies (for gastroparesis)
- Small bowel transit studies
Pancreatic Exocrine Insufficiency:
- Fecal elastase
- Note: Falsely low results may occur with diarrhea 1
Bile Acid Malabsorption:
- 48-hour fecal bile acid excretion
- Serum C4 and FGF19 (if available) 1
Celiac Disease:
- Tissue transglutaminase IgA and total IgA levels 1
Special Considerations
When to Consider Empiric Treatment Without Testing
- In patients with high clinical suspicion and typical symptoms
- In patients with severe symptoms and known predisposing conditions
- When testing is unavailable or impractical
Common Pitfalls to Avoid
- Overdiagnosis: Not all bloating and abdominal discomfort is due to SIBO 3
- Misinterpretation of breath tests: False positives can occur with rapid intestinal transit 1
- Overlooking underlying causes: Treating SIBO without addressing the predisposing condition leads to recurrence
- Neglecting nutritional assessment: SIBO can cause significant malabsorption and nutritional deficiencies 1
High-Risk Populations Requiring Closer Attention
- Patients with chronic intestinal dysmotility 1
- Post-surgical patients (especially after ileocecal valve resection)
- Patients with inflammatory bowel disease (up to 30% in Crohn's disease) 1
- Patients with chronic pancreatitis (up to 92% with PEI) 1
- Elderly patients (risk increases with age) 4
By following this systematic approach to SIBO diagnosis, clinicians can accurately identify affected patients and initiate appropriate treatment to improve symptoms and quality of life 5.