Vitamins and Supplements for Long COVID Gastrointestinal Symptoms
Vitamins K2 (240 μg) and D3 (2000 IU) daily are the most effective supplements for treating long COVID gastrointestinal symptoms based on the most recent high-quality randomized controlled trial evidence. 1
Understanding Long COVID Gastrointestinal Manifestations
Long COVID gastrointestinal symptoms commonly include:
- Nausea
- Abdominal pain
- Loss of appetite
- Heartburn
- Constipation
These symptoms are associated with significant gut microbiota dysbiosis that can persist for at least 14 months after initial infection 2. Key findings in long COVID patients include:
- Higher levels of Ruminococcus gnavus and Bacteroides vulgatus
- Lower levels of Faecalibacterium prausnitzii
- Low levels of butyrate-producing bacteria (strongly correlated with long COVID at 6 months)
- Potential SARS-CoV-2 RNA persistence in stool (12.7% at 4 months, 3.8% at 7 months)
- Higher levels of fungal translocation from gut/lung epithelium
Evidence-Based Supplementation Approach
First-Line Recommendation:
- Vitamins K2 (240 μg) and D3 (2000 IU) daily 1
- Demonstrated in a 2025 randomized controlled trial with 151 participants
- Showed significant improvement in:
- Long COVID symptom index
- Number of long COVID symptoms
- Reduction in inflammatory markers (sTNF-RI and sCD163)
- Reduction in fungal translocation marker (1,3)-β-d-glucan
- Reduction in oxidized LDL
Additional Supportive Supplements:
- B-complex vitamins - Included in multiple studies showing benefit 3, 4
- Vitamin C - Demonstrated anti-inflammatory properties 3, 4
- Acetyl-L-carnitine - Helps with energy metabolism and fatigue 3, 4
For Patients with Confirmed Deficiencies:
- Magnesium - Particularly if deficient; may have synergistic effects with vitamin D 5
- Additional vitamin D3 - If levels are below 20 ng/mL, as lower levels are associated with persistent long COVID symptoms 6
Mechanism of Action
The beneficial effects of these supplements likely work through several pathways:
- Anti-inflammatory effects - Vitamins K2 and D3 reduce systemic inflammation markers
- Gut microbiome modulation - May help restore healthy gut bacteria balance
- Reduction of fungal translocation - Particularly important as higher fungal translocation is associated with long COVID
- Immune system regulation - Vitamins D and C support proper immune function
- Mitochondrial support - Acetyl-L-carnitine improves energy metabolism
Monitoring and Follow-up
- Assess symptom improvement after 4-6 weeks
- Consider vitamin D level testing at baseline and after 3 months of supplementation
- Monitor for resolution of specific gastrointestinal symptoms
Important Caveats
- While gastrointestinal symptoms tend to resolve more quickly than neurological symptoms of long COVID 2, they can still persist for months
- Probiotic supplementation with Bifidobacterium longum may be beneficial based on preliminary research showing improvement in mice given gut bacteria from long COVID patients 2
- Current evidence for nutritional interventions is still emerging, with the strongest evidence supporting vitamins K2 and D3 1
Conclusion
For a female in her late 20s with long COVID gastrointestinal symptoms, a daily regimen of vitamins K2 (240 μg) and D3 (2000 IU) represents the most evidence-based approach based on the most recent randomized controlled trial. This can be supplemented with B-complex vitamins, vitamin C, and acetyl-L-carnitine for additional support.