How is Autoimmune Lymphoproliferative Syndrome (ALPS) diagnosed?

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Diagnosis of Autoimmune Lymphoproliferative Syndrome (ALPS)

The diagnosis of ALPS requires the presence of two required criteria (chronic lymphadenopathy/splenomegaly and elevated double-negative T cells) plus at least one primary accessory criterion (defective lymphocyte apoptosis or pathogenic FAS pathway mutation). 1

Required Diagnostic Criteria

  1. Chronic lymphadenopathy and/or splenomegaly

    • Must persist for ≥6 months
    • If lymphadenopathy is isolated, it must affect at least 2 nodal chains
    • Neoplastic and infectious causes must be excluded
    • Hepatomegaly may be present but is not sufficient in isolation
  2. Elevated CD3+TCRαβ+CD4-CD8- double-negative T cells (DNT)

    • ≥1.5% of total lymphocytes OR
    • ≥2.5% of CD3+ lymphocytes
    • Must be measured in the setting of normal or elevated lymphocyte counts
    • Lymphopenia invalidates this criterion

Primary Accessory Criteria (one required for definitive diagnosis)

  1. Defective lymphocyte apoptosis

    • Must be demonstrated in 2 separate assays
    • Acceptable tests include direct FAS activation or TCR restimulation
  2. Pathogenic mutation

    • Somatic or germline mutation in FAS, FASLG, or CASP10 genes
    • FAS gene mutations account for approximately 85% of genetically confirmed cases 2

Secondary Accessory Criteria (one required for probable diagnosis)

  1. Elevated biomarkers (any one of the following):

    • Plasma sFASL levels ≥200 pg/mL
    • Plasma IL-10 levels ≥20 pg/mL
    • Serum/plasma vitamin B12 levels ≥1500 ng/L
    • Plasma IL-18 levels ≥500 pg/mL
  2. Characteristic histopathology

    • Requires review by an experienced hematopathologist
    • Typically shows florid paracortical expansion of double-negative T cells in lymph nodes 3
  3. Combined autoimmune manifestations:

    • Autoimmune cytopenias (hemolytic anemia, thrombocytopenia, or neutropenia)
    • PLUS elevated IgG levels (polyclonal hypergammaglobulinemia)
  4. Family history

    • Non-malignant/non-infectious lymphoproliferation with or without autoimmunity

Diagnostic Algorithm

  1. Initial screening for patients with:

    • Persistent lymphadenopathy and/or splenomegaly
    • Autoimmune cytopenias
    • Recurrent fever without clear infectious cause 4
  2. First-line testing:

    • Complete blood count with differential
    • Flow cytometry to quantify CD3+TCRαβ+CD4-CD8- DNT cells
    • Immunoglobulin levels (looking for hypergammaglobulinemia)
    • Biomarkers: vitamin B12, IL-10, IL-18, and sFASL levels
  3. Confirmatory testing (if required criteria are met):

    • Lymphocyte apoptosis assays (in specialized centers)
    • Genetic testing for FAS, FASLG, and CASP10 mutations

Diagnostic Classification

  • Definitive ALPS: Both required criteria + one primary accessory criterion
  • Probable ALPS: Both required criteria + one secondary accessory criterion

Important Considerations and Pitfalls

  • DNT levels between 1.0-1.5% of total lymphocytes may be seen in healthy individuals or as a reactive phenomenon in conditions like systemic lupus erythematosus 1
  • DNT levels above 3% of total lymphocytes (or 5% of T cells) are rarely seen in conditions other than ALPS and are essentially pathognomonic 1
  • The lymphocyte apoptosis assay is no longer considered essential for diagnosis, as patients with somatic FAS mutations or germline FASLG mutations may have normal FAS-induced apoptosis assays 1
  • Differential diagnosis includes infections, autoimmune diseases, primary immunodeficiencies, and malignancies, particularly lymphoma 3, 5
  • Flow cytometry must distinguish TCRαβ+ DNT cells from TCRγδ+ DNT cells or natural killer T cells, which can also be CD3+CD4-CD8- 1
  • Each laboratory should develop age-adjusted reference ranges for DNT cells and report both percentage and absolute numbers 1

From a clinical perspective, patients with probable ALPS should be treated and monitored similarly to those with definitive diagnosis, but genetic or apoptosis assay-based diagnostic workup should be pursued whenever possible 1.

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Clinical, immunological, and genetic features in 780 patients with autoimmune lymphoproliferative syndrome (ALPS) and ALPS-like diseases: A systematic review.

Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology, 2021

Research

Autoimmune Lymphoproliferative Syndrome: An Overview.

Archives of pathology & laboratory medicine, 2020

Research

[Autoimmune lymphoproliferative syndrome: a case report].

The Pan African medical journal, 2022

Research

[Autoimmune lymphoproliferative syndrome. Update and review].

Revista alergia Mexico (Tecamachalco, Puebla, Mexico : 1993), 2019

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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