What is the role of fecal immunoassay testing in diagnosing gastrointestinal infections, such as Clostridioides (C. difficile) difficile?

Medical Advisory BoardAll articles are reviewed for accuracy by our Medical Advisory Board
Educational purpose only • Exercise caution as content is pending human review
Article Review Status
Submitted
Under Review
Approved

Last updated: August 29, 2025View editorial policy

Personalize

Help us tailor your experience

Which best describes you? Your choice helps us use language that's most understandable for you.

Role of Fecal Immunoassay Testing in Diagnosing C. difficile Infection

Fecal immunoassay testing should be used as part of a two-step algorithm for diagnosing Clostridioides difficile infection (CDI), with enzyme immunoassays (EIAs) for glutamate dehydrogenase (GDH) as an initial screening test followed by toxin A/B detection for confirmation. 1

Diagnostic Approach for C. difficile

When to Test

  • Test only unformed stool samples from symptomatic patients with ≥3 unformed stools in 24 hours 1, 2
  • Consider testing in:
    • Patients >2 years of age with diarrhea following antimicrobial use
    • Patients with healthcare-associated diarrhea
    • Patients with persistent diarrhea without an identified cause 1

Optimal Specimen Collection

  • Fresh diarrheal stool sample (takes the shape of the container) is the preferred specimen 1
  • For patients with suspected severe CDI complicated by ileus who cannot produce stool specimens, perirectal swabs may be used (sensitivity 95.7%, specificity 100%) 1
  • A single stool specimen is sufficient; multiple specimens do not increase diagnostic yield 1

Recommended Testing Algorithms

Two-Step Algorithm (Preferred Approach)

  1. First step: GDH screening test (high sensitivity)

    • GDH is an enzyme produced by C. difficile in large amounts
    • Detects presence of C. difficile but doesn't differentiate toxigenic from non-toxigenic strains
  2. Second step: Toxin A/B EIA (high specificity)

    • If GDH positive, confirm with toxin detection
    • Detects actual toxins produced by C. difficile
    • Fast, convenient, and inexpensive but with variable sensitivity (32-98%) 1

Interpretation of Results

  • Negative GDH: Report as negative for CDI 2
  • Positive GDH + positive toxin: Report as positive for CDI 2
  • Positive GDH + negative toxin: Cannot differentiate between infection and colonization 2

Alternative Testing Methods

Nucleic Acid Amplification Tests (NAATs)

  • Highly sensitive (80-100%) and specific (87-99%) for detecting toxigenic C. difficile 1
  • Can be used as a standard diagnostic test for CDI
  • May be used alone in patients with high clinical suspicion or as part of a two-step algorithm 1

Important Limitations of NAATs

  • Cannot distinguish between active infection and asymptomatic colonization
  • May lead to overdiagnosis and overtreatment when used alone 1
  • Should be performed only in patients with high suspicion for CDI 1

Reference Methods (Not Routinely Used)

  • Toxigenic culture (TC): Gold standard but slow and labor-intensive
  • Cell cytotoxicity neutralization assay (CCNA): Detects fecal toxins but slow and labor-intensive 1

Pitfalls and Caveats

  1. Testing asymptomatic patients: Do not test formed stool as this can result in false positives and unnecessary treatment 1

  2. Repeat testing: Generally not recommended during the same diarrheal episode unless there is ongoing clinical suspicion during an epidemic or high clinical suspicion during endemic situations 1

  3. Test interpretation: A positive bacterial culture or NAAT without toxin detection may indicate colonization rather than infection 2

  4. Clinical correlation: Laboratory results must be interpreted in the context of clinical presentation, as no single test is perfect 1, 2

  5. Public health reporting: All specimens that test positive by culture-independent diagnostic testing should be cultured in clinical or public health laboratories to ensure outbreaks are detected 1

Summary of Test Characteristics

Test Sensitivity Specificity Advantages Disadvantages
GDH EIA High Moderate Excellent screening test Cannot differentiate toxigenic strains
Toxin A/B EIA 32-98% 84-100% Fast, inexpensive Variable sensitivity
NAATs 80-100% 87-99% High sensitivity, rapid results May detect colonization, not just infection
Toxigenic culture High High Gold standard Slow, labor-intensive
CCNA High High Reference method Slow, labor-intensive

By implementing appropriate testing algorithms and correctly interpreting results in the clinical context, fecal immunoassay testing plays a crucial role in accurately diagnosing C. difficile infection while minimizing both underdiagnosis and overdiagnosis.

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Prevention and Management of Clostridioides difficile Infection

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

Have a follow-up question?

Our Medical A.I. is used by practicing medical doctors at top research institutions around the world. Ask any follow up question and get world-class guideline-backed answers instantly.