What labs should be checked for a patient with a 9-month history of amenorrhea (absence of menstruation)?

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Laboratory Evaluation for 9-Month Amenorrhea

For a patient with a 9-month history of amenorrhea, a comprehensive laboratory workup should include pregnancy test, FSH, LH, estradiol, prolactin, and TSH as the initial screening panel to determine the underlying cause. 1

Initial Laboratory Testing

The following laboratory tests should be ordered for all patients with secondary amenorrhea:

  • Pregnancy test - Must be performed first to exclude pregnancy 2
  • FSH and LH levels - To differentiate between hypothalamic, pituitary, and ovarian causes 1
  • Estradiol - To assess ovarian function 1
  • Prolactin - To rule out hyperprolactinemia 1
  • TSH - To exclude thyroid dysfunction 1, 3

Interpretation of Initial Results

Based on the initial laboratory results, the cause of amenorrhea can be categorized:

  • Elevated FSH (>35 IU/L): Suggests primary ovarian insufficiency 1
  • Normal/Low FSH with normal/low LH: Suggests hypothalamic amenorrhea 1, 3
  • LH/FSH ratio >2: Suggests polycystic ovary syndrome (PCOS) 1
  • Elevated prolactin (>20 μg/L): Suggests hyperprolactinemia 2, 1
  • Abnormal TSH: Suggests thyroid dysfunction 1, 3

Second-Tier Laboratory Testing

Based on initial results, additional testing may be indicated:

For suspected PCOS:

  • Testosterone and free testosterone - Values >2.5 nmol/L suggest hyperandrogenism 1
  • Androstenedione - Values >10.0 nmol/L suggest adrenal or ovarian androgen excess 1
  • DHEAS - To assess adrenal androgen production 1
  • Fasting glucose/insulin ratio - To assess insulin resistance 1
  • Lipid profile - To assess cardiovascular risk 1, 4

For suspected primary ovarian insufficiency:

  • Anti-Müllerian hormone (AMH) - Low levels indicate diminished ovarian reserve 2
  • Karyotype - To rule out chromosomal abnormalities, especially in younger patients 4

For suspected hypothalamic amenorrhea:

  • Complete blood count - To assess for anemia or other systemic conditions 3
  • Comprehensive metabolic panel - To assess liver and kidney function 3

Imaging Studies

Based on laboratory findings, the following imaging may be indicated:

  • Transvaginal ultrasound - To evaluate ovarian morphology, follicle count, and endometrial thickness 1

    • Look for ≥20 follicles per ovary and/or ovarian volume ≥10ml (suggestive of PCOS)
    • Assess endometrial thickness and rule out structural abnormalities
  • Pituitary MRI - Indicated if prolactin is elevated or if there are symptoms suggesting a pituitary disorder 2

Common Pitfalls to Avoid

  1. Failing to rule out pregnancy first - Always perform a pregnancy test before proceeding with other testing 2

  2. Misinterpreting FSH levels - A single FSH measurement may not be diagnostic; consider repeating in 4-6 weeks if results are equivocal 3

  3. Overlooking medication effects - Many medications can cause amenorrhea, including hormonal contraceptives, antipsychotics, and certain antidepressants 4

  4. Ignoring timing of blood tests - Hormonal measurements should ideally be performed during the early follicular phase (days 3-6) of the cycle in women with irregular cycles 2

  5. Missing eating disorders or excessive exercise - These are common causes of hypothalamic amenorrhea and require specific questioning 4

By following this systematic laboratory approach, the underlying cause of amenorrhea can be identified in most cases, allowing for appropriate management and treatment to reduce long-term health risks associated with untreated amenorrhea, including osteoporosis and cardiovascular disease.

References

Guideline

Evaluation and Management of Primary Amenorrhea

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Amenorrhea: an approach to diagnosis and management.

American family physician, 2013

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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