What is autoimmune encephalitis?

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Autoimmune Encephalitis

Autoimmune encephalitis (AE) is a group of non-infectious immune-mediated inflammatory disorders of the brain parenchyma often involving the cortical or deep grey matter with or without involvement of the white matter, meninges or the spinal cord. 1

Definition and Pathophysiology

  • AE comprises inflammatory conditions where the immune system mistakenly attacks brain tissue, leading to neurological and psychiatric symptoms 1
  • Originally described in the context of paraneoplastic conditions, but now recognized to occur with or without associated tumors 1
  • Can be antibody-mediated (targeting cell-surface or synaptic proteins) or cell-mediated (targeting intracellular antigens) 1

Clinical Presentation

  • Typically presents with acute or subacute onset (less than 3 months duration) 1
  • Chronic presentations are less common but can occur in specific subtypes (LGI1, CASPR2, DPPX, and GAD65-antibody encephalitis) 1
  • Often preceded by viral infection, fever, or viral-like prodrome 1
  • May be triggered by herpes simplex virus encephalitis or immune-modulating therapies such as TNFα inhibitors and immune-checkpoint inhibitors 1

Common Clinical Features:

  • Cognitive dysfunction and memory impairment 1
  • Psychiatric symptoms (psychosis, hallucinations, agitation) 2
  • Seizures, including new-onset refractory status epilepticus (NORSE) 1
  • Movement disorders (dystonia, dyskinesia) 2
  • Autonomic dysfunction (blood pressure fluctuations, cardiac arrhythmias) 1
  • Speech disorders 2
  • Decreased level of consciousness 1

Diagnostic Approach

Step 1: Confirm focal or multifocal brain pathology

  • Brain MRI with and without contrast (may show T2/FLAIR hyperintensities in limbic regions or other areas) 1
  • EEG if MRI is negative or if patient is encephalopathic/having seizures (may show focal slowing, seizures, lateralized periodic discharges) 1
  • Brain FDG-PET if MRI is negative and diagnosis remains uncertain (may show hypermetabolism or hypometabolism patterns specific to certain AE subtypes) 1

Step 2: Confirm inflammatory etiology

  • Lumbar puncture for CSF analysis:
    • Cell count, protein, glucose, oligoclonal bands, IgG index 1
    • CSF neuronal autoantibodies panel 1
    • Rule out infectious causes (viral PCR, bacterial culture) 1
  • Blood tests:
    • Serum neuronal autoantibodies panel 1
    • Inflammatory markers, antithyroid antibodies, metabolic panel 1
    • Sodium level monitoring (hyponatremia is common in LGI1-antibody encephalitis) 1

Step 3: Screen for associated neoplasm

  • CT chest, abdomen, and pelvis with contrast 1
  • Mammogram/breast MRI in relevant cases 1
  • Pelvic or testicular ultrasound 1
  • Whole body FDG-PET if initial screening is negative 1

Treatment

Acute Management

  • First-line immunotherapy:

    • Intravenous methylprednisolone (IVMP) is the most commonly used first-line agent (chosen by 84% of specialists for general AE presentation) 1
    • Intravenous immunoglobulin (IVIG) if steroids are contraindicated or ineffective 1
    • Plasma exchange (PLEX) particularly effective in patients with high thromboembolic risk or severe hyponatremia 1
    • Combined first-line therapies may be considered in severe cases (e.g., NMDAR-antibody encephalitis, new-onset refractory status epilepticus) 1
  • Second-line immunotherapy (if no response to first-line agents):

    • Rituximab (preferred by 80% of specialists) for antibody-mediated autoimmunity 1
    • Cyclophosphamide for suspected cell-mediated autoimmunity 1
    • Half of specialists recommend adding second-line therapy only after failure of multiple first-line agents, while 32% recommend adding after failure of one first-line agent 1
  • For refractory cases:

    • Consider experimental therapies such as IL-6 inhibitors (tocilizumab) or bortezomib 1, 3

Supportive Care

  • Antiseizure medications for seizure control 1
  • Management of dysautonomia (monitoring blood pressure and heart rate) 1
  • Careful correction of hyponatremia if present 1
  • Temporary pacemaker may be needed for severe dysrhythmia 1
  • Intracranial pressure monitoring in cases with massive inflammation and brain edema 1

Prognosis

  • Early aggressive treatment is associated with better functional outcomes and fewer relapses 4
  • Approximately half of patients require second-line immunotherapy 4
  • A small but significant proportion of patients are refractory to all first- and second-line therapies 3
  • Chronic disability is common despite treatment, highlighting the need for comprehensive rehabilitation 5

Common Pitfalls and Caveats

  • Delay in diagnosis and treatment can lead to worse outcomes - consider AE early in patients with unexplained neuropsychiatric symptoms 1
  • Neuronal autoantibody results are often unavailable during initial evaluation - treatment should not be delayed while waiting for antibody results 1
  • Normal CSF studies do not exclude AE - testing for neuronal autoantibodies is still recommended with high clinical suspicion 1
  • AE can mimic primary psychiatric disorders, infectious encephalitis, or neurodegenerative conditions 1
  • Blood samples for antibody testing should be collected before treatment with IVIG or PLEX to avoid false results 1

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Treatment strategies for autoimmune encephalitis.

Therapeutic advances in neurological disorders, 2018

Research

Immunotherapy in autoimmune encephalitis.

Current opinion in neurology, 2022

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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