When is testing for Antithrombin (AT) deficiency recommended?

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Last updated: October 13, 2025View editorial policy

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Testing for Antithrombin Deficiency

Testing for antithrombin (AT) deficiency is recommended in patients with venous thromboembolism (VTE) occurring at a young age (e.g., <50 years), in the absence of identifiable risk factors, especially when there is a strong family history of VTE. 1

Recommended Testing Scenarios

High-Priority Testing Scenarios

  • Testing is recommended for patients with a first episode of VTE occurring in the absence of a major reversible risk factor, as AT deficiency is a major persistent pro-thrombotic condition that may warrant indefinite anticoagulation 1
  • Testing should be considered in patients with recurrent VTE episodes, as AT deficiency significantly increases the risk of recurrence 1
  • Testing is appropriate for first-degree relatives of individuals with confirmed AT deficiency, particularly if the index case had thrombotic events 1

Moderate-Priority Testing Scenarios

  • Testing should be considered in patients with VTE at unusual body sites 1
  • Testing may be appropriate for patients with thrombosis during pregnancy 1
  • Testing should be considered in patients with heparin resistance (inability to achieve therapeutic anticoagulation despite adequate heparin dosing) 2

Low-Priority Testing Scenarios

  • Testing may be considered in patients with liver disease of unknown etiology, as AT deficiency can be associated with liver pathology 1
  • Testing may be considered in patients with the syndrome of Wegener's granulomatosis (antiproteinase-3 vasculitis) 1

Testing Methodology

Initial Testing

  • The recommended initial test is an AT activity (functional) assay 3, 4
  • Normal AT activity levels generally exclude AT deficiency 3
  • For borderline normal AT plasma levels (12-35 μmol/L or 90-140 mg/dL), further qualitative testing is recommended 1

Follow-up Testing

  • If AT activity is low, an antigen test should be performed to calculate an activity-to-antigen ratio, which helps differentiate between type I (quantitative) and type II (qualitative) deficiencies 3, 5
  • Repeat testing on a separate sample is recommended to confirm the diagnosis 5
  • Consider molecular testing when available, as it may help determine thrombosis risk (which varies among different mutations) and identify mutations that might be missed by traditional activity assays 3

Special Considerations

Pediatric Testing

  • Use pediatric reference ranges for AT testing until the age of 6 months, as normal newborns and infants have physiologically lower AT levels (20-80% of adult values) 2, 3

Excluding Acquired Causes

  • Before diagnosing hereditary AT deficiency, rule out acquired causes of low AT levels 3, 4:
    • Liver dysfunction
    • Proteinuria/nephrotic syndrome
    • Heparin therapy
    • Disseminated intravascular coagulation (DIC)
    • Acute thrombosis
    • Recent surgery
    • Pregnancy
    • Oral contraceptive use

Potential False Results

  • Be aware of factors that can cause falsely normal or elevated AT activity results 3:
    • Direct thrombin inhibitors (argatroban, bivalirudin, dabigatran) in factor IIa-based assays
    • Direct factor Xa inhibitors (rivaroxaban, apixaban, edoxaban) in factor Xa-based assays

Clinical Implications of Testing

  • Confirmed AT deficiency has significant implications for anticoagulation management and duration 1
  • Patients with AT deficiency and a history of VTE are often candidates for indefinite anticoagulant treatment 1
  • AT deficiency may require special management during high-risk periods such as surgery, pregnancy, or prolonged immobilization 2, 6
  • In pediatric patients with VTE who have failed to respond clinically to standard anticoagulation, AT level measurement may be indicated to guide potential AT replacement therapy 1

Common Pitfalls to Avoid

  • Avoid testing during acute thrombotic events, as this may lead to falsely low AT levels 3, 4
  • Do not rely solely on AT activity levels without considering clinical context and family history 5
  • Remember that heterozygous AT deficiency typically presents with AT levels approximately 40-60% of normal, while homozygous deficiency is usually fatal in utero 5, 7
  • Consider that different types of AT deficiency (type I vs. various type II subtypes) have different thrombotic risks 5

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Management of Antithrombin III Deficiency

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Laboratory tests for antithrombin deficiency.

American journal of hematology, 2010

Research

Inherited antithrombin deficiency: a review.

Haemophilia : the official journal of the World Federation of Hemophilia, 2008

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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