What is the treatment for Candida auris in urine?

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Treatment of Candida auris in Urine

For Candida auris urinary tract infections, echinocandins (caspofungin, micafungin, or anidulafungin) are recommended as first-line therapy due to the multidrug-resistant nature of C. auris, despite their limited urinary excretion. 1

Treatment Algorithm Based on Clinical Presentation

Symptomatic Candiduria (Cystitis)

  • For suspected C. auris cystitis, echinocandins are recommended as first-line therapy despite limited urinary excretion, due to the multidrug-resistant nature of C. auris 1
  • Caspofungin (70-mg loading dose, then 50 mg daily), micafungin (100 mg daily), or anidulafungin (200-mg loading dose, then 100 mg daily) are the preferred echinocandins 2
  • Liposomal amphotericin B (5 mg/kg daily) is an alternative first-line agent for C. auris UTI, particularly if there is concern for systemic spread 1
  • For persistent infection, consider amphotericin B deoxycholate bladder irrigation (50 mg/L sterile water daily for 5 days) as adjunctive therapy 2

Pyelonephritis or Systemic Risk

  • For upper tract infection or patients at risk for dissemination, use systemic therapy with an echinocandin 1
  • Combination therapy may be considered for severe infections or treatment failures (echinocandin plus amphotericin B) 1
  • Flucytosine (25 mg/kg 4 times daily) may be added as part of combination therapy for resistant isolates 2, 1

Special Considerations for C. auris

  • C. auris differs from other Candida species due to its multidrug resistance pattern and high transmissibility in healthcare settings 3
  • Unlike treatment recommendations for other Candida species, fluconazole should not be used as first-line therapy for C. auris due to high rates of resistance 1, 3
  • Antifungal susceptibility testing should be performed to guide therapy, as resistance patterns vary 3
  • FKS1 mutations in C. auris can confer echinocandin resistance, necessitating alternative therapy if detected 4

Management of Urinary Catheters and Obstruction

  • Remove or replace indwelling urinary catheters when possible, as this alone may resolve candiduria in up to 50% of cases 2, 5
  • Elimination of urinary tract obstruction is strongly recommended as a critical part of treatment 2
  • For patients with nephrostomy tubes or stents, consider removal or replacement if feasible 2

Monitoring and Follow-up

  • Monitor for clinical improvement and obtain follow-up urine cultures to confirm clearance of infection 6
  • For persistent infection despite appropriate therapy, consider imaging to rule out anatomical abnormalities or fungus balls 2
  • Implement strict infection control measures to prevent transmission to other patients, as C. auris can persist in the healthcare environment 1, 3

Common Pitfalls to Avoid

  • Do not use lipid formulations of amphotericin B for isolated lower UTI, as they do not achieve adequate urine concentrations 2
  • Avoid treating asymptomatic candiduria in patients without risk factors for dissemination 2, 6
  • Do not rely on standard laboratory identification methods, as C. auris is frequently misidentified as other Candida species 3
  • Recognize that C. auris infections often require more aggressive treatment than other Candida species due to multidrug resistance 1, 3

References

Research

Candida auris Urinary Tract Infections and Possible Treatment.

Antibiotics (Basel, Switzerland), 2020

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Candida urinary tract infections: treatment options.

Expert review of anti-infective therapy, 2007

Guideline

Treatment of Candiduria with Urinary Frequency

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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