Diagnostic Approach to Cerebrospinal Fluid Inflammation
When inflammatory indicators are found in cerebrospinal fluid (CSF), a systematic diagnostic approach focusing on viral encephalitis, bacterial meningitis, and autoimmune encephalitis should be implemented, with treatment guided by the specific etiology identified.
Initial CSF Analysis
- CSF analysis is the cornerstone of diagnosis for suspected CNS inflammation and should include opening pressure, cell count with differential, protein, glucose (with simultaneous blood glucose), and appropriate microbiological studies 1
- Normal CSF typically contains <5 white blood cells/μL, protein <45 mg/dL, and a CSF:blood glucose ratio >0.6 1
- In viral encephalitis, expect moderate pleocytosis (tens to hundreds of cells/μL, typically lymphocytic), mildly elevated protein, and normal CSF:plasma glucose ratio 1
- For traumatic taps, correct white cell count by subtracting 1 white cell for every 7000 red blood cells/μL in the CSF 1
- CSF lactate <2 mmol/L helps rule out bacterial meningitis 1
- CSF/blood glucose ratio is a precise indicator for bacterial meningitis (optimal cut-off=0.36, sensitivity=92.9%, specificity=92.9%) 2
Specific Testing for Viral Causes
- All patients with suspected encephalitis should have CSF PCR testing for HSV-1, HSV-2, VZV, and enteroviruses as these account for 90% of identified viral cases 1
- If the first CSF examination is normal in suspected HSV encephalitis, a second CSF examination 24-48 hours later is likely to show abnormalities 1
- For patients where PCR was not performed acutely, obtain CSF and serum samples 10-14 days after illness onset for HSV-specific IgG antibody testing 1
- Intrathecal synthesis of HSV-specific IgG antibodies is typically detected after 10-14 days of illness and can persist for years 1
Testing for Autoimmune Causes
- Consider autoimmune encephalitis when encountering:
- Subacute onset (weeks to months)
- Intractable seizures
- Orofacial dyskinesia, choreoathetosis, or faciobrachial dystonia
- Hyponatremia (especially with LGI1 antibodies)
- Psychiatric symptoms 1
- Test for neuronal surface antibodies (NSAbs) and intracellular antibodies in both serum and CSF 1
- CSF findings in autoimmune encephalitis vary by antibody type:
- NMDAR, GABAB, and AMPA receptor antibodies: frequent inflammatory CSF changes
- CASPR2, LGI1, GABAA, or glycine receptor antibodies: often normal CSF
- GAD antibodies: positive oligoclonal bands without other changes 3
Oligoclonal Bands
- Oligoclonal bands (OCBs) in CSF but not in serum indicate intrathecal IgG synthesis and reflect local B-cell response in CNS inflammation 4
- OCBs are present in >95% of multiple sclerosis patients but can also be found in other inflammatory neurological conditions 4
- When ADEM (acute disseminated encephalomyelitis) is in the differential diagnosis, CSF should be tested for oligoclonal bands with a paired serum sample 1
- Increased white blood cell count is associated with the presence of oligoclonal bands in CSF 5
Additional Diagnostic Tests
- Collect acute and convalescent blood samples for serological testing, especially when EBV, arboviruses, Lyme disease, cat scratch disease, rickettsiosis, or ehrlichioses are suspected 1
- Consider throat and rectal swabs for enterovirus investigations in all patients with suspected viral encephalitis 1
- When respiratory symptoms are present, collect respiratory samples for PCR testing of respiratory viruses 1
- For suspected mumps encephalitis, perform CSF PCR and collect parotid gland duct or buccal swabs 1
Imaging Considerations
- Brain MRI should be performed before lumbar puncture if there are clinical contraindications such as focal neurological signs, papilledema, seizures, or reduced consciousness 1
- In suspected spine infection, imaging is important for suggesting diagnosis, guiding biopsy procedures, and defining extent of infection 1
Common Pitfalls and Caveats
- CSF may be normal in early viral encephalitis (especially HSV), particularly in immunocompromised patients and children - repeat LP after 24-48 hours if clinical suspicion remains high 1
- Acellular CSF can occur in viral encephalitis caused by VZV, EBV, and CMV, especially in immunocompromised patients 1
- Lymphocytic pleocytosis can be seen in both viral and bacterial infections (particularly tuberculosis, listeriosis, and partially treated bacterial meningitis) 1
- Routine CSF studies may be normal in some autoimmune encephalitis patients; testing neuronal autoantibody panels is recommended even with normal CSF if clinical suspicion is high 1
- Blood samples should be collected prior to treatment with intravenous immunoglobulins or plasmapheresis to avoid false positive or false negative antibody results 1