What is the treatment for a pilonidal cyst?

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Treatment of Pilonidal Cysts

Incision and drainage is the primary treatment for inflamed pilonidal cysts, followed by appropriate wound management and consideration for definitive surgical excision once inflammation resolves. 1

Initial Management

  • Incision and drainage (I&D) is the cornerstone treatment for acute, inflamed pilonidal cysts to evacuate pus and break up loculations 1
  • After surgical drainage, the wound can be managed in one of two ways:
    • Open wound healing (secondary intention) by covering the surgical site with a dry dressing 1
    • Closed wound healing (primary closure) by suturing the wound closed 1
  • Packing the wound with gauze is not recommended as it causes more pain without improving healing outcomes 2

Antibiotic Therapy

  • Systemic antibiotics are generally unnecessary for uncomplicated pilonidal cysts after I&D unless there is extensive surrounding cellulitis or systemic signs of infection 1
  • Signs of systemic infection warranting antibiotics include: temperature >38°C or <36°C, tachypnea >24 breaths per minute, tachycardia >90 beats per minute, or white blood cell count >12,000 or <400 cells/µL 2
  • For recurrent pilonidal abscesses, a 5-10 day course of antibiotics active against the cultured pathogen may be considered 1

Definitive Treatment

  • For recurrent pilonidal cysts at the same site, complete excision of the cyst and its wall is recommended once acute inflammation has resolved 2
  • Several surgical techniques exist for definitive treatment:
    • Excision with open healing (secondary intention)
    • Excision with primary closure
    • Incision and curettage 3

Post-Surgical Wound Care

  • An adequate wound care regimen after surgery includes:
    • Appropriate wound debridement
    • Rinsing with antimicrobial solution
    • Topical treatments to promote healing
    • Appropriate dressing selection 4
  • Complete wound closure typically occurs within an average of 76 days with proper wound care 4

Special Considerations

  • Histological examination of all excised pilonidal cyst tissue is essential, as malignant transformation can occur in rare cases (estimated at 0.1% of cases) 5
  • Squamous cell carcinoma is the most common malignancy associated with chronic pilonidal disease 6
  • Chronic, recurrent pilonidal cysts with long-standing inflammation (especially those present for many years) should raise suspicion for potential malignant transformation 6

Common Pitfalls to Avoid

  • Avoid closing the wound without adequate drainage, as this may lead to recurrent infection 2
  • Do not routinely prescribe antibiotics unless there are signs of systemic infection 2
  • Never ignore a pilonidal cyst that changes in appearance, grows rapidly, or fails to heal properly, as these could be signs of malignant transformation 5, 6

References

Guideline

Treatment of Pilonidal Cysts

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Management of Inflamed Draining Sebaceous Cysts

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Pilonidal cyst: cause and treatment.

Diseases of the colon and rectum, 2000

Research

Is histological examination necessary when excising a pilonidal cyst?

The American journal of case reports, 2015

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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