What is the primary cause of anal cancer?

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Last updated: October 26, 2025View editorial policy

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Primary Cause of Anal Cancer

Human papillomavirus (HPV) infection is the primary cause of anal cancer, representing the causative agent in 80-85% of patients, particularly HPV types 16 and 18. 1

HPV Infection and Anal Cancer

  • HPV is associated with approximately 90% of anal squamous cell cancers, making it second only to cervical cancer in the closeness of its association with this virus 1, 2
  • HPV-16 can be detected in approximately 90% of HPV-positive cases of anal squamous cell carcinoma 2
  • Squamous cell carcinoma of the anus (SCCA) and its precursor lesion, anal intraepithelial neoplasia (AIN), are mostly attributable to HPV infection 1
  • The progression from precursor lesions to invasive cancer typically follows a slow pattern, with progression from AIN 3 to invasive malignancy being uncommon in immunocompetent patients 3

Risk Factors for HPV Persistence and Anal Cancer

  • Factors increasing the risk of persistent HPV infection and subsequent malignancy include:
    • Anal intercourse and high lifetime number of sexual partners 1, 4
    • Human immunodeficiency virus (HIV) infection 1, 3
    • Immune suppression in transplant recipients 1
    • Use of immunosuppressants such as long-term corticosteroids 1
    • History of other HPV-related cancers 1
    • Autoimmune disorders 1
    • Cigarette smoking 1, 4
    • Prior history of anogenital warts 1, 4

High-Risk Populations

  • Men who have sex with men (MSM) have significantly higher risk of HPV infection and HPV-related disease compared to heterosexual men 5, 4
  • The incidence of anal cancer in MSM is approximately 35 per 100,000 1
  • In HIV-positive MSM, the incidence increases dramatically to 75-135 per 100,000 1
  • HIV-positive individuals have a 30-fold higher risk of developing anal cancer compared to the general population 3
  • The incidence is also higher among HIV-positive women 1

Epidemiology and Trends

  • Anal cancer is a rare disease, accounting for 1-2% of digestive tract tumors and 2-4% of anorectal tumors 1, 3
  • The annual incidence is approximately 0.5-2.0 per 100,000 people 1, 3
  • The incidence of anal cancer in Europe, Australia, and the United States is increasing 1, 2
  • In the United States, there has been more than a doubling increase in the reported number of new, age-adjusted cases per 100,000 people per year over the last 40 years 1

Prevention

  • HPV vaccination holds promise for anal cancer prevention for those not already HPV-infected 2, 6
  • The quadrivalent HPV vaccine has shown efficacy in preventing 77.5% of high-grade squamous intraepithelial lesions/anal intraepithelial neoplasia secondary to HPV 6,11,16, or 18 5, 6
  • Currently, no national recommendations exist for cytologic screening to prevent anal cancers, despite the high risk in certain populations 1, 5

Clinical Implications

  • Most early-stage anal cancers are asymptomatic, reflecting the typically slow growth pattern 3
  • Common presenting symptoms include bleeding, pain, itching, discharge, and sensation of a rectal mass 1, 3
  • Diagnosis is often delayed because bleeding is attributed to hemorrhoids 1
  • The median age for diagnosis of anal cancer is 69 years, suggesting a long latency period 3

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

The epidemiology of anal cancer.

Sexual health, 2012

Guideline

Anal Cancer Growth Rate and Characteristics

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Clearance of Anal HPV in Men Who Have Sex with Men

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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