What is the treatment for a suspected Staphylococcal (Staph) species contamination in a blood culture?

Medical Advisory BoardAll articles are reviewed for accuracy by our Medical Advisory Board
Educational purpose only • Exercise caution as content is pending human review
Article Review Status
Submitted
Under Review
Approved

Last updated: November 3, 2025View editorial policy

Personalize

Help us tailor your experience

Which best describes you? Your choice helps us use language that's most understandable for you.

Management of Suspected Staphylococcal Blood Culture Contamination

When a single blood culture grows Staphylococcus species (particularly coagulase-negative staphylococci), obtain additional blood cultures from different sites before initiating antibiotics to distinguish true bacteremia from contamination. 1, 2

Distinguishing Contamination from True Infection

Key Clinical Indicators

Multiple positive blood cultures from different anatomical sites strongly indicate true bacteremia rather than contamination. 1, 2 The probability of contamination is 65-94% when coagulase-negative staphylococci (CoNS) appear in blood cultures. 2

  • Single positive culture with concurrent negative cultures: Likely represents contamination and does not require antibiotic therapy 1, 2
  • Multiple positive cultures (≥2 sets) from different sites: Indicates true bacteremia requiring treatment 1, 2
  • Growth in only one bottle of a set: Suggests contamination 1

Critical Pitfall to Avoid

Do not automatically initiate vancomycin therapy for a single positive CoNS blood culture. 2 This leads to unnecessary antibiotic exposure, increased costs, and potential adverse effects. Instead, obtain repeat blood cultures to confirm bacteremia before starting treatment. 1, 2

Species-Specific Management

Coagulase-Negative Staphylococci (CoNS)

For suspected contamination (single positive culture):

  • Obtain additional blood cultures from peripheral sites 1, 2
  • Withhold antibiotics pending repeat culture results 2
  • Monitor for clinical signs of infection (fever, hemodynamic instability, presence of intravascular devices) 1

For confirmed CoNS bacteremia (multiple positive cultures):

  • Remove short-term catheters if present 1
  • Treat for 5-7 days if catheter removed 1, 3, 2
  • Treat for 10-14 days with systemic therapy plus antimicrobial lock therapy if catheter retained 1, 3
  • Use vancomycin 15-20 mg/kg IV every 8-12 hours (adjusted for renal function) as first-line therapy 3, 4

Important Exception: Staphylococcus lugdunensis

Manage S. lugdunensis similarly to S. aureus despite being coagulase-negative. 2 This species has higher virulence and can cause endocarditis and metastatic infections requiring aggressive treatment. 2

Staphylococcus aureus

Even a single positive blood culture for S. aureus should be treated as true bacteremia, not contamination. 1, 3, 5

Immediate actions required:

  • Initiate empiric vancomycin or daptomycin while awaiting susceptibility results 3, 5
  • Remove all intravascular catheters 1, 3
  • Obtain repeat blood cultures at 48-72 hours to document clearance 1, 3
  • Perform transthoracic echocardiography (minimum evaluation) 1

Laboratory Approach to Reduce Contamination

Proper Collection Technique

Collect at least two blood culture sets (ideally 60 mL total blood) from different anatomical sites sequentially without time intervals. 1 Each set should include one aerobic and one anaerobic bottle with 10 mL blood per bottle. 1

Key collection practices:

  • Disinfect venipuncture site with chlorhexidine or 2% iodine tincture 1
  • Avoid catheter-drawn cultures when possible due to higher contamination risk 1
  • Ensure proper bottle filling (10 mL per bottle) to optimize yield 1

Laboratory Reporting Standards

Laboratories should have abbreviated workup protocols for common contaminants. 1 When CoNS or other skin flora grow in a single culture, laboratories may provide abbreviated identification without full susceptibility testing, with a comment instructing clinicians to contact the laboratory if clinically significant. 1

Contamination rates should not exceed 3% in well-functioning systems. 1

Rapid Diagnostic Testing

Rapid molecular PCR testing can identify Staphylococcus species and detect mecA gene within 75 minutes, reducing time to appropriate therapy by approximately 39 hours. 1, 3, 6, 7 However, rapid tests should only be used with concomitant standard blood cultures, not as standalone diagnostics. 1

Benefits of rapid PCR:

  • Earlier switch from vancomycin to beta-lactams for methicillin-susceptible S. aureus (MSSA), improving outcomes 1, 6
  • Reduced unnecessary anti-MRSA therapy for CoNS contamination 6
  • Faster appropriate therapy initiation (5.2 hours vs 49.8 hours for MSSA) 6

Clinical Algorithm for Management

Step 1: Initial blood culture result shows gram-positive cocci in clusters

  • Obtain at least one additional blood culture set from a different site 1, 2
  • Assess for clinical signs of infection (fever, hemodynamic instability, indwelling devices) 1

Step 2: Determine if single or multiple positive cultures

  • Single positive: Likely contamination; withhold antibiotics and await repeat cultures 1, 2
  • Multiple positive: Treat as true bacteremia 1, 2

Step 3: Species identification

  • S. aureus: Initiate treatment immediately, remove catheters, obtain echocardiography 1, 3
  • CoNS (except S. lugdunensis): Confirm with multiple cultures before treating 1, 2
  • S. lugdunensis: Treat as S. aureus 2

Step 4: Antibiotic selection based on susceptibility

  • MSSA: Switch to cefazolin or antistaphylococcal penicillin (nafcillin) 3, 8, 5
  • MRSA: Continue vancomycin or use daptomycin 3, 4, 5
  • CoNS: Vancomycin for confirmed bacteremia 3, 4

Step 5: Source control

  • Remove infected catheters, particularly for S. aureus 1, 3
  • Drain abscesses if present 1
  • Evaluate for metastatic foci in S. aureus bacteremia 1, 5

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

Have a follow-up question?

Our Medical A.I. is used by practicing medical doctors at top research institutions around the world. Ask any follow up question and get world-class guideline-backed answers instantly.