What virus causes stomach flu, also known as viral gastroenteritis?

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Last updated: November 6, 2025View editorial policy

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"Stomach Flu" Is Not Caused by Influenza Virus

"Stomach flu" is a misleading colloquial term for viral gastroenteritis, which has no biological association with influenza viruses. The term is commonly used to describe the illness because low-grade fever and body aches can accompany the gastrointestinal symptoms, but the causative agents are entirely different viruses that specifically target the gastrointestinal tract 1.

Primary Viral Causes of "Stomach Flu"

The viruses that actually cause what people call "stomach flu" include:

Most Common Pathogens

  • Norovirus is the leading cause of epidemic viral gastroenteritis in people of all ages, with GII.4 strains associated with the majority of outbreaks worldwide since 2001 1

  • Rotavirus is the most common cause of severe diarrhea in children under 5 years of age, infecting virtually every child by age 4 years and causing potentially lethal dehydration in 0.75% of children less than 2 years old 1

  • Adenoviruses (particularly serotypes 40 and 41) contribute to 5%-20% of hospitalizations for childhood diarrhea in developed countries, with peak incidence among children less than 2 years of age 1

  • Caliciviruses (including sapovirus) account for approximately 3% of children hospitalized for diarrhea, with most people acquiring antibodies by age 12 1, 2

  • Astrovirus is another important etiologic agent of acute gastroenteritis, particularly in children 3, 4

Clinical Distinction from Influenza

Symptom Profile

  • Viral gastroenteritis presents with acute onset nonbloody diarrhea, vomiting, nausea, and abdominal cramps as primary symptoms 1
  • Incubation periods vary: 12-48 hours for norovirus, 1-3 days for rotavirus and calicivirus 1, 2
  • Illness typically resolves in 1-3 days for most patients, though children, elderly, and hospitalized patients may experience 4-6 day courses 1

Why the Confusion Exists

  • The term "stomach flu" persists because low-grade fever and body aches can accompany gastrointestinal symptoms, superficially resembling influenza 1
  • However, true influenza is a respiratory illness caused by influenza A or B viruses, not gastrointestinal viruses 1

Important Clinical Caveat

Healthcare providers should avoid reinforcing the "stomach flu" terminology with patients, as it perpetuates confusion about influenza vaccination and disease prevention strategies. Influenza vaccines protect against respiratory influenza viruses but provide no protection against the gastrointestinal viruses that cause viral gastroenteritis 1.

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Sapovirus Infection Characteristics and Prevention

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Gastroenteritis viruses: an overview.

Novartis Foundation symposium, 2001

Research

Viruses causing gastroenteritis.

Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases, 2003

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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