What is the workup for a patient with amenorrhea (absent periods)?

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Workup for Amenorrhea

Begin with a pregnancy test, followed by measurement of FSH, LH, TSH, and prolactin levels, along with pelvic ultrasonography to identify the underlying cause and guide management. 1

Initial Clinical Assessment

History

  • Menstrual history: Document age of menarche, cycle regularity, and duration of amenorrhea (primary amenorrhea if no menarche by age 16; secondary amenorrhea if cessation of regular menses for 3 months or irregular menses for 6 months) 1, 2, 3
  • Weight and nutrition: Assess for eating disorders, excessive exercise (Female Athlete Triad), and recent weight changes, as these commonly cause functional hypothalamic amenorrhea 1, 3
  • Medication review: Document use of hormonal contraceptives, antipsychotics, antiepileptics, and chemotherapy agents 1, 4
  • Symptom assessment: Evaluate for galactorrhea (hyperprolactinemia), hirsutism/acne (hyperandrogenism/PCOS), hot flashes (ovarian insufficiency), and headaches/visual changes (pituitary pathology) 1, 2, 3

Physical Examination

  • BMI calculation: Obesity suggests PCOS; low BMI suggests hypothalamic amenorrhea 1
  • Tanner staging: Assess breast and pubic hair development to differentiate primary from secondary amenorrhea 1
  • Thyroid examination: Palpate for enlargement or nodules 1
  • Signs of hyperandrogenism: Look for hirsutism, acne, and male-pattern baldness 3

Laboratory Testing

First-Line Tests (All Patients)

  • Pregnancy test (urine β-hCG): Must be performed first to exclude pregnancy, regardless of sexual history 1, 4, 2, 3
  • FSH and LH: Elevated FSH (>40 mIU/mL) indicates primary ovarian insufficiency; low/normal FSH with low LH suggests hypothalamic amenorrhea; LH/FSH ratio >2 suggests PCOS 1, 2, 3
  • Prolactin: Elevated levels (>25 ng/mL) indicate hyperprolactinemia, often from pituitary adenoma 1, 2, 3
  • TSH: Identifies thyroid dysfunction as a reversible cause 1, 2, 3

Second-Line Tests (Based on Initial Results)

  • Estradiol level: Low levels (<20 pg/mL) confirm hypoestrogenism in hypothalamic amenorrhea 1
  • Testosterone and DHEA-S: Evaluate for hyperandrogenism if PCOS suspected or if signs of virilization present 3
  • Karyotype: Indicated in primary amenorrhea with elevated FSH to diagnose Turner syndrome or other chromosomal abnormalities 2, 3, 5
  • Progesterone challenge test: Can differentiate PCOS (positive withdrawal bleed) from functional hypothalamic amenorrhea (negative), though endometrial thickness on ultrasound is more reliable 6, 1

Imaging Studies

Pelvic Ultrasonography

  • Transvaginal ultrasound (preferred in sexually active patients): More sensitive than transabdominal for detecting structural abnormalities 1, 7
  • Assess endometrial thickness: Thin endometrium (<5 mm) suggests estrogen deficiency; thick endometrium (>8 mm) suggests chronic anovulation with unopposed estrogen 6, 1
  • Ovarian morphology: Polycystic ovarian morphology (≥12 follicles per ovary or ovarian volume >10 mL) supports PCOS diagnosis 7
  • Anatomic abnormalities: Identify Müllerian anomalies, imperforate hymen, or vaginal septum in primary amenorrhea 2, 5

Brain MRI

  • Indicated when: Prolactin >100 ng/mL, visual field defects, headaches, or other neurological symptoms to evaluate for pituitary adenoma or hypothalamic lesions 2, 3

Diagnostic Algorithm by FSH Level

Elevated FSH (>40 mIU/mL): Primary Ovarian Insufficiency

  • Confirm with repeat FSH 4 weeks later (two elevated values required for diagnosis) 6
  • Karyotype if age <40 years to identify Turner syndrome or premature ovarian insufficiency 2, 3, 5
  • Note: These patients can maintain unpredictable ovarian function and should not be presumed infertile 2, 3

Low/Normal FSH with Low LH: Hypothalamic Amenorrhea

  • Evaluate for: Eating disorders, excessive exercise, stress, low body weight 1, 2, 3
  • Screen for low bone density with DEXA scan, as these patients are at high risk for osteoporosis 1, 3
  • Check estradiol: Low levels confirm hypoestrogenism 1

Normal FSH and LH (or LH/FSH >2): PCOS

  • Assess for metabolic syndrome: Fasting glucose, lipid panel, and consider oral glucose tolerance test 2, 3
  • Screen for endometrial hyperplasia if prolonged amenorrhea (>6 months) due to unopposed estrogen 3

Elevated Prolactin: Hyperprolactinemia

  • Repeat prolactin to confirm (avoid stress, fasting, recent breast stimulation) 2, 3
  • Brain MRI if prolactin >100 ng/mL or if symptoms suggest pituitary adenoma 2, 3
  • Exclude medications: Antipsychotics, metoclopramide, and other dopamine antagonists 3

Critical Pitfalls to Avoid

  • Never skip the pregnancy test: Even in patients reporting no sexual activity or using contraception, pregnancy must be excluded first 1, 4
  • Don't assume amenorrhea equals infertility: Patients with primary ovarian insufficiency can have unpredictable ovarian function and may ovulate sporadically 2, 3
  • Recognize tamoxifen interference: Hormone levels and absence of menses are unreliable indicators of menopause during tamoxifen treatment 4
  • Don't rely solely on progesterone challenge: Up to 60% of women with functional hypothalamic amenorrhea may have withdrawal bleeding, making this test less reliable than previously thought 6
  • Address bone health urgently: Patients with hypothalamic amenorrhea or primary ovarian insufficiency require prompt evaluation and treatment for osteoporosis risk 1, 3

References

Guideline

Initial Workup for Irregular Menses (Oligomenorrhea or Amenorrhea)

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Amenorrhea: an approach to diagnosis and management.

American family physician, 2013

Guideline

Management of Amenorrhea

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Irregular or absent periods--what can an ultrasound scan tell you?

Best practice & research. Clinical obstetrics & gynaecology, 2004

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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