What causes low secretory Immunoglobulin A (sIgA) in stool?

Medical Advisory BoardAll articles are reviewed for accuracy by our Medical Advisory Board
Educational purpose only • Exercise caution as content is pending human review
Article Review Status
Submitted
Under Review
Approved

Last updated: November 17, 2025View editorial policy

Personalize

Help us tailor your experience

Which best describes you? Your choice helps us use language that's most understandable for you.

What Causes Low Secretory IgA (sIgA) in Stool

Low secretory IgA in stool is most commonly caused by selective IgA deficiency (SIGAD), defined as serum IgA <7 mg/dL with normal IgG and IgM levels, affecting approximately 1 in 300-700 white individuals in the United States. 1, 2

Primary Immunodeficiency Causes

Selective IgA Deficiency (SIGAD) is the leading cause:

  • Affects patients older than 4 years with serum IgA <7 mg/dL and normal IgG/IgM levels 1, 2
  • Represents the most common primary immunodeficiency disorder 3, 4
  • Prevalence is significantly lower in Asian populations (approximately 1:18,000) 1
  • Family history of SIGAD or Common Variable Immunodeficiency (CVID) present in 20-25% of cases 1, 2
  • Higher prevalence may occur in male patients 1

Common Variable Immunodeficiency (CVID):

  • Some patients with SIGAD progress to CVID later in life 1, 2
  • CVID represents the severe end of the immunodeficiency spectrum with SIGAD at the milder end 3
  • Can present with late-onset opportunistic infections, gastrointestinal disease, and lymphomas 1

Good Syndrome:

  • Associated with thymoma and similar immunologic features to CVID 1
  • Requires thymoma excision, though this does not normalize immune function 1

Secondary and Medication-Induced Causes

Drug-induced IgA deficiency is reversible and must be investigated:

  • Antiepileptic medications: phenytoin, carbamazepine, valproic acid, zonisamide 1, 2
  • Anti-inflammatory drugs: sulfasalazine, NSAIDs 1, 2
  • Immunomodulators: gold, penicillamine, hydroxychloroquine 1, 2
  • Cessation of the offending medication often leads to reversal of IgA deficiency 1, 2

Biologic therapies affecting B-cell trafficking:

  • Vedolizumab (anti-α4β7 integrin) lowers stool sIgA levels even after a single dose in healthy volunteers 5
  • MAdCAM-1 blockade compromises IgA antibody-secreting cell recruitment to intestinal lamina propria 5
  • These agents interfere with B-cell homing to gut-associated lymphoid tissue 5

Pathophysiologic Mechanisms

B-cell maturation defects:

  • Terminal lymphocyte differentiation defect leads to underproduction of serum and mucosal IgA 3, 4
  • IgA genes themselves are normal; the defect lies in B-cell maturation 3
  • Alterations in TACI (transmembrane activator and calcium modulator and cyclophilin ligand interactor) gene act as disease-modifying mutations 4

Genetic susceptibility:

  • Certain MHC haplotypes associated with increased susceptibility 4
  • Genetic basis remains incompletely understood 4

Clinical Implications and Associated Conditions

Infection risk:

  • Increased susceptibility to respiratory and gastrointestinal infections, particularly Giardia lamblia 1, 2, 6
  • Impaired specific antibody responses, especially to pneumococcal polysaccharide antigens 1
  • Most IgA-deficient individuals remain asymptomatic due to compensatory mechanisms, including secretory IgM 5, 3

Autoimmune disease associations:

  • Celiac disease is the most common association 1, 2, 3
  • Autoimmune thyroid disease and type 1 diabetes 1, 2
  • Atopic diseases occur frequently 1

Diagnostic Approach

Essential initial testing:

  • Measure total serum IgA level to confirm deficiency 1, 2
  • Only methods detecting IgA <7 mg/dL can determine true absence versus very low levels 1
  • Approximately two-thirds have detectable low IgA; one-third have completely absent IgA 1

When evaluating for celiac disease in patients with low IgA:

  • IgA-based tissue transglutaminase (tTG) testing will yield false-negative results 1
  • Use IgG-based tests: IgG-tTG or IgG deamidated gliadin peptides 1, 2
  • Consider duodenal biopsy even with negative antibodies if clinical suspicion remains high 1

Medication history is critical:

  • Thoroughly investigate all current and recent medications 1, 2
  • Discontinuation of causative drugs may restore IgA production 1, 2

Management Considerations

For symptomatic patients with recurrent infections:

  • Aggressive antimicrobial therapy or prophylactic antibiotics for recurrent sinopulmonary infections 1, 2
  • No role for IgG replacement therapy in isolated SIGAD (unlike CVID) 1
  • Treat atopic disease aggressively when present 1, 2

Transfusion precautions:

  • Risk of anaphylactic reactions to blood products due to anti-IgA antibodies 1, 3
  • Although severe reactions are rare, some centers use IgA-deficient donor products or washed cells 1

Long-term monitoring:

  • Vigilance for progression to CVID 1, 2
  • Monitor for development of autoimmune diseases and malignancy 1
  • Screen for celiac disease given strong association 1, 2

Common Pitfalls to Avoid

  • Do not overlook medication-induced causes, as these are reversible 1, 2
  • Do not rely solely on IgA-based celiac testing in patients with known or suspected IgA deficiency 1
  • Do not assume all IgA-deficient patients are symptomatic—most remain asymptomatic throughout life 3, 4
  • Do not ignore family history, as 20-25% have affected relatives 1, 2

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Low Secretory Immunoglobulin A (SIgA) in Stool: Causes and Clinical Implications

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

The clinical significance of immunoglobulin A deficiency.

Annals of clinical biochemistry, 2007

Research

Selective IgA deficiency.

Journal of clinical immunology, 2010

Research

The Underappreciated Role of Secretory IgA in IBD.

Inflammatory bowel diseases, 2023

Research

Diagnosis and treatment of gastrointestinal disorders in patients with primary immunodeficiency.

Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association, 2013

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

Have a follow-up question?

Our Medical A.I. is used by practicing medical doctors at top research institutions around the world. Ask any follow up question and get world-class guideline-backed answers instantly.