What are the differential diagnoses for a patient presenting with sore throat, fever, swollen lymph node, cough, and headache?

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Differential Diagnosis for Sore Throat, Fever, Swollen Lymph Node, Cough, and Headache

The presence of cough strongly suggests a viral upper respiratory tract infection rather than bacterial pharyngitis, and testing or antibiotics are not indicated unless specific features suggest Group A Streptococcus or other serious bacterial infection. 1, 2

Primary Consideration: Viral Upper Respiratory Infection

The constellation of symptoms—particularly the presence of cough alongside sore throat, fever, headache, and lymphadenopathy—points overwhelmingly toward viral etiology:

  • Viral URI is the most likely diagnosis when cough accompanies pharyngitis symptoms, as cough is highly suggestive of viral origin and uncommon in bacterial pharyngitis 1, 2
  • Common viral causes include rhinovirus, coronavirus, adenovirus, influenza virus, parainfluenza virus, respiratory syncytial virus, Epstein-Barr virus, and enteroviruses 1
  • The presence of cough, along with other respiratory symptoms, strongly suggests viral rather than streptococcal etiology 1, 2

Key Bacterial Consideration: Group A Streptococcus (GAS)

While less likely given the cough, GAS pharyngitis must be considered in specific circumstances:

  • GAS pharyngitis typically presents WITHOUT cough—the absence of cough is actually part of the modified Centor criteria used to assess likelihood of streptococcal infection 1
  • Suspicious features for GAS include: sudden-onset severe sore throat, tonsillopharyngeal exudates, tender anterior cervical adenopathy, fever, scarlatiniform rash, palatal petechiae, and swollen tonsils 1
  • Testing for GAS should NOT be performed when clinical features strongly suggest viral etiology (presence of cough, rhinorrhea, conjunctivitis, hoarseness, or diarrhea) 1
  • GAS is primarily a disease of children 5-15 years of age and occurs most commonly in winter and early spring 1

Other Important Differential Diagnoses

Influenza

  • Commonly presents with fever, headache, myalgias, and constitutional symptoms accompanied by respiratory symptoms including cough 1, 2
  • Nausea and vomiting as presenting symptoms are common, particularly with influenza 2

Infectious Mononucleosis (Epstein-Barr Virus)

  • Presents with pharyngitis, fever, and generalized lymphadenopathy (not just cervical) 1, 3
  • Often accompanied by splenomegaly and prolonged fatigue 3
  • More common in adolescents and young adults 3

Other Bacterial Causes (Less Common)

  • Groups C and G β-hemolytic streptococci: Can cause pharyngitis but no specific treatment guidelines exist 1
  • Mycoplasma pneumoniae or Chlamydia pneumoniae: Consider when associated with atypical pneumonia 1, 3
  • Arcanobacterium haemolyticum: Rare in the United States; associated with scarlet fever-like rash in teenagers and young adults 1, 3
  • Neisseria gonorrhoeae: Consider in sexually active individuals with pharyngitis 1

COVID-19

  • Presents with fever, cough, headache, sore throat, and malaise 1
  • May include nasal congestion, runny nose, and systemic symptoms 1
  • Consider based on epidemiological exposure and community prevalence 1

Clinical Decision Algorithm

Step 1: Assess for viral features (any present = likely viral)

  • Cough present? 1, 2
  • Nasal congestion or rhinorrhea? 1, 2
  • Conjunctivitis? 1
  • Hoarseness? 1
  • Diarrhea? 1

If YES to any above: Viral URI is the diagnosis—no testing or antibiotics needed 1, 2

Step 2: If NO viral features, apply Modified Centor Criteria for GAS

  • Fever by history (1 point)
  • Tonsillar exudates (1 point)
  • Tender anterior cervical adenopathy (1 point)
  • Absence of cough (1 point) 1

If <3 criteria: No testing needed 1 If ≥3 criteria: Perform rapid antigen detection test or throat culture 1

Critical Pitfalls to Avoid

  • Do not test for GAS when cough is present—this identifies carriers rather than acute infections and leads to unnecessary antibiotic use 1, 4
  • Do not prescribe antibiotics for viral pharyngitis—they provide no benefit and increase adverse events 1, 2
  • Do not assume purulent appearance requires antibiotics—viral infections commonly cause tonsillar exudates 1, 2
  • Watch for red flags suggesting serious conditions: difficulty swallowing, drooling, neck swelling, or severe toxicity may indicate peritonsillar abscess, epiglottitis, or Lemierre syndrome requiring urgent evaluation 1

Management Based on Diagnosis

For Viral URI (most likely in this case):

  • No antibiotics indicated 1, 2
  • Symptomatic treatment with analgesics, antipyretics, and supportive care 1, 2
  • Expected duration 5-7 days, may persist up to 10 days 2
  • Reassess if symptoms persist beyond 10 days, worsen after initial improvement, or severe symptoms develop 2

For Confirmed GAS (only if tested and positive):

  • Penicillin or amoxicillin is first-line treatment 1, 4
  • Treatment duration: 10 days to prevent rheumatic fever 1, 3

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Viral Upper Respiratory Tract Infection Diagnosis and Management

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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