What is CRE (Carbapenem-Resistant Enterobacteriaceae)?

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What is CRE (Carbapenem-Resistant Enterobacteriaceae)?

CRE are Enterobacteriaceae bacteria that demonstrate resistance to carbapenem antibiotics (doripenem, imipenem, or meropenem), representing one of the most serious antimicrobial resistance threats in healthcare settings with high associated morbidity and mortality. 1

Definition and Classification

Carbapenem-resistant Enterobacteriaceae (CRE) are defined as Enterobacteriaceae that are resistant to doripenem, imipenem, or meropenem. 1 This definition encompasses both carbapenemase-producing organisms and those with other resistance mechanisms. 1

The term "carbapenemase-producing Enterobacteriaceae" (CPE) is more precise than CRE, as it specifically identifies organisms producing carbapenemase enzymes as the primary resistance mechanism, though other mechanisms like porin loss can also confer carbapenem resistance. 1, 2

Major Carbapenemase Enzyme Classes

CRE produce three main classes of carbapenemase enzymes based on the Ambler classification system: 1, 3

  • Class A carbapenemases: KPC (Klebsiella pneumoniae carbapenemase) - most common in the United States, Colombia, Argentina, Greece, and Italy 1, 2
  • Class B metallo-β-lactamases (MBLs): NDM, VIM, IMP - NDM-1 predominates in India, Pakistan, and Sri Lanka 1, 4, 2
  • Class D carbapenemases: OXA-48-like enzymes - endemic in Turkey, Malta, Middle East, and North Africa 1, 2

Clinical Significance and Epidemiology

CRE infections are associated with high mortality rates, particularly among critically ill patients with prolonged hospitalization and those exposed to invasive devices such as ventilators or central venous catheters. 1 The World Health Organization identified CRE as a pathogen of critical threat in their global priority list of antibiotic-resistant bacteria. 1

In the United States, carbapenem-resistant Klebsiella pneumoniae (CRKP) is the most commonly encountered CRE species. 1 CDC data showed that 8% of all Klebsiella isolates were CRKP in 2007, compared to fewer than 1% in 2000. 1

Resistance Mechanisms

The three major mechanisms by which Enterobacteriaceae develop carbapenem resistance are: 2

  • Enzyme production (most important): Carbapenemase enzymes that hydrolyze carbapenems 1, 2
  • Efflux pumps: Active transport systems that expel antibiotics 2
  • Porin mutations: Reduced membrane permeability 1, 2

The carbapenemase genes are typically carried on mobile genetic elements (plasmids and transposons), which dramatically increases the risk for rapid dissemination between bacterial species and across healthcare facilities. 1, 5

Treatment Implications

Rapid identification of the specific carbapenemase family (KPC, NDM, VIM, OXA-48-like) is crucial because each class confers different susceptibility profiles requiring distinct treatment strategies. 1

Metallo-β-lactamases (MBLs like NDM) are particularly concerning because they hydrolyze all β-lactam classes except monobactams (aztreonam), and classic serine β-lactamase inhibitors cannot inhibit them. 1, 4 For MBL-producing CRE, ceftazidime/avibactam plus aztreonam is preferred as first-line therapy. 4

For KPC-producing CRE, novel β-lactam agents such as ceftazidime/avibactam and meropenem/vaborbactam are recommended. 1

Infection Control Requirements

All acute care facilities must implement aggressive infection control strategies for CRE, including contact precautions for all patients with CRE and enhanced environmental cleaning. 1

In non-endemic areas, facilities should: 1

  • Review microbiology records for the preceding 6-12 months to identify previously unrecognized CRE 1
  • Perform point prevalence culture surveys in high-risk units if CRE are discovered 1, 4
  • Conduct active surveillance cultures of patients with epidemiologic links to CRE cases 1, 4

Patients with history of CRE colonization or infection should have their medical records flagged for future admissions. 4

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Carbapenem-Resistant Enterobacteriaceae.

Clinics in laboratory medicine, 2017

Guideline

New Delhi Metallo-Beta-Lactamase (NDM) Infections

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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