Recommended Serology Test for Suspected Lyme Disease
The standard of care for laboratory diagnosis of suspected Lyme disease (when serologic testing is indicated) is two-tiered testing: first-tier enzyme-linked immunoassay (EIA/ELISA) or immunofluorescence assay (IFA), followed by reflex Western immunoblot only if the first test is positive or equivocal. 1
When to Order Serologic Testing
Do NOT order serologic testing for patients with erythema migrans (EM) in endemic areas — these patients should be diagnosed clinically without laboratory confirmation, as approximately 70-80% of Lyme disease patients present with EM and can be treated based on clinical findings alone 2, 3
Order two-tiered testing only for:
The Two-Tiered Testing Algorithm
First Tier: EIA/ELISA or IFA
- Use a sensitive screening test (EIA/ELISA or IFA) that measures overall IgM and IgG antibody response to Borrelia burgdorferi antigens 1
- Most laboratories use whole-cell sonicate preparation, though newer FDA-cleared EIAs using VlsE or C6 peptide antigens offer similar sensitivity with higher specificity 1
- If first-tier result is negative: Report as negative and stop testing 1
- If first-tier result is positive or equivocal: Proceed to second-tier Western immunoblot 1
Second Tier: Western Immunoblot
- Perform separate IgM and IgG Western immunoblots based on disease duration 1
- For disease duration <30 days: Interpret both IgM and IgG immunoblots 1
- For disease duration ≥30 days: Interpret only IgG immunoblot (IgM results are not reliable after 30 days) 1
- If immunoblot is positive: Report as positive serologic result 1
- If immunoblot is negative: Report as negative serologic result 1
Test Performance Characteristics
Sensitivity varies dramatically by disease stage:
Specificity is consistently high: >95% across all disease stages when two-tiered testing is performed correctly 1, 2
The two-tiered approach increases specificity to >98% by reducing false-positives from the first-tier EIA alone 1
Critical Pitfalls to Avoid
Never order Western immunoblot without first performing EIA/IFA — this dramatically increases false-positive rates and violates testing guidelines 2
Geographic exposure history is paramount — in low-incidence states without recent travel to endemic areas, positive predictive value drops to only 10%, and only 0.7% of patients in non-endemic areas with arthritis, cranial neuropathies, or meningitis actually have Lyme disease 2
Do not retest after treatment — antibodies persist for months to years after successful treatment and do not indicate active infection 2, 3
Avoid urine antigen tests and CD57 tests — these lack validation and should not be used 2
Consider syphilis cross-reactivity — if positive results occur, perform Treponema pallidum hemagglutination assay to exclude cross-reactivity 1, 3
Special Considerations for Early Disease
If clinical suspicion remains high despite negative serology in early disease: Order convalescent serology 3-4 weeks later, as sensitivity improves from 40% to 61% during this window 2, 4
Negative serology does not exclude Lyme disease in the first 2-4 weeks due to the antibody window period 3
Antibiotic treatment during early infection reduces antibody response — this accounts for reduced clinical sensitivity (50%) of two-tiered testing in some studies where patients were treated early 5