What is the workup for irregular menses (irregular menstrual cycles) in pediatric patients?

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Workup for Irregular Menses in Pediatric Patients

Begin with a pregnancy test, followed by hormonal assessment (FSH, LH, TSH, prolactin, estradiol), and pelvic ultrasound when clinical features suggest ovarian pathology. 1, 2

Initial Clinical Assessment

Obtain a detailed menstrual and medical history focusing on:

  • Age of menarche and duration of irregularity 1
  • Weight changes, eating patterns, and exercise habits to screen for Female Athlete Triad or disordered eating 1
  • Medication use, particularly hormonal contraceptives, antipsychotics, and antiepileptics 1
  • Symptoms of galactorrhea, hirsutism, or acne suggesting hyperandrogenism 1, 2
  • Calculate BMI, as obesity is associated with PCOS and menstrual irregularities 1

Physical examination should include:

  • Tanner staging of breast and pubic hair development 1
  • Thyroid examination for enlargement or nodules 1
  • Assessment for signs of hyperandrogenism (hirsutism, acne) 2

Laboratory Testing Algorithm

First-line tests (perform in all patients):

  • Pregnancy test - must be performed first to exclude pregnancy 1, 2
  • FSH and LH - measure between days 3-6 of menstrual cycle when possible; three measurements 20 minutes apart for accuracy 2
  • TSH and T4 - to exclude thyroid dysfunction 2
  • Prolactin - to rule out hyperprolactinemia 2
  • Estradiol - measure during early follicular phase to establish baseline ovarian function 2

Second-line tests (based on clinical presentation):

  • Testosterone and androstenedione - if signs of hyperandrogenism present 2
  • DHEAS - if non-classical congenital adrenal hyperplasia suspected 2
  • Progesterone - measure mid-luteal phase (day 21 of 28-day cycle); levels <6 nmol/L indicate anovulation 2
  • Fasting glucose and insulin - if metabolic disorders or PCOS suspected 2

Key interpretation points:

  • LH/FSH ratio >2 suggests PCOS 1, 2
  • Elevated FSH (>40 mIU/mL) indicates primary ovarian insufficiency; requires confirmation with repeat FSH 4 weeks later 1
  • Low progesterone (<5 ng/mL) throughout cycle suggests anovulation 1

Imaging Studies

Pelvic ultrasound indications:

  • Clinical features or hormonal tests suggest ovarian pathology 1
  • Perform transvaginal ultrasound (more sensitive than transabdominal) between days 3-9 of cycle 2
  • Assess endometrial thickness: thin (<5 mm) suggests estrogen deficiency; thick (>8 mm) suggests chronic anovulation with unopposed estrogen 1
  • 10 peripheral cysts (2-8 mm diameter) with thickened ovarian stroma suggest polycystic ovaries 2

Pituitary MRI - indicated if clinical features or laboratory results suggest hypothalamic-pituitary abnormalities 2

Referral Criteria

Refer to pediatric endocrinology/gynecology for:

  • No signs of puberty by age 13 years 3
  • Primary amenorrhea by age 16 years 3
  • Failure of pubertal progression 3
  • Menstrual cycle dysfunction suggesting premature ovarian insufficiency 3
  • Persistent abnormal hormone levels or severe menstrual irregularities 2
  • Concern for eating disorder or Female Athlete Triad 1
  • Signs of premature ovarian insufficiency (amenorrhea with elevated FSH in patients under 40) 2

Special Considerations for Cancer Survivors

For survivors treated with gonadotoxic chemotherapy or ovarian radiation:

  • Monitor growth (height) and pubertal development (Tanner stage) at least annually 3
  • FSH and estradiol recommended for those presenting with menstrual cycle dysfunction 3
  • Discontinue hormone replacement therapy prior to laboratory evaluation when applicable 3
  • AMH may be reasonable in conjunction with FSH and estradiol for patients ≥25 years 3

Common Pitfalls to Avoid

  • Do not rely on single FSH measurement - levels fluctuate significantly, particularly during perimenopause 2
  • Do not measure hormones at incorrect cycle times - timing is critical for accurate interpretation 2
  • Do not assume all irregular menses in adolescents are physiologic - pathology requiring treatment may be present even in early post-menarchal years 4, 5
  • Do not perform hormonal testing while patient is on hormonal contraception - discontinue for accurate assessment 2
  • Do not overlook non-reproductive causes - thyroid disorders, medications, stress, and weight changes affect hormone levels 2
  • Do not delay evaluation in patients with disordered eating - assess for low bone density 1

References

Guideline

Initial Workup for Irregular Menses (Oligomenorrhea or Amenorrhea)

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Investigating Irregular Menstrual Cycles

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Menstrual Irregularities.

Pediatric annals, 2018

Research

[Causes of menstrual disorders in adolescent girls--a retrospective study].

Endokrynologia, diabetologia i choroby przemiany materii wieku rozwojowego : organ Polskiego Towarzystwa Endokrynologow Dzieciecych, 2006

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Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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