What is the recommended treatment for enteroinvasive Escherichia coli (E. coli) infection?

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Last updated: December 1, 2025View editorial policy

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Treatment of Enteroinvasive E. coli (EIEC) Infection

For enteroinvasive E. coli found in stool, treat with either TMP-SMX (160/800 mg twice daily for 3 days) or a fluoroquinolone (ciprofloxacin 500 mg, norfloxacin 400 mg, or ofloxacin 300 mg twice daily for 3 days) as first-line therapy. 1

First-Line Antibiotic Options

The Infectious Diseases Society of America guidelines establish clear treatment protocols for EIEC, which causes dysentery similar to Shigella through invasion of the large bowel mucosa 1, 2:

For immunocompetent patients:

  • TMP-SMX 160/800 mg twice daily for 3 days (if susceptible) 1, 3
  • OR Fluoroquinolone for 3 days: 1, 3
    • Ciprofloxacin 500 mg twice daily
    • Norfloxacin 400 mg twice daily
    • Ofloxacin 300 mg twice daily

For immunocompromised patients:

  • Same regimens but extend duration to 7-10 days 1, 3

Alternative Agents

Azithromycin is an important alternative, particularly when:

  • Dysentery is present 3
  • Fever accompanies watery diarrhea 3
  • Travel to regions with high fluoroquinolone resistance has occurred 3

Azithromycin dosing options: 3

  • 500 mg once daily for 3 days
  • OR 1 gram single dose (better adherence, though may cause more GI side effects)

Ceftibuten has demonstrated efficacy in pediatric dysentery caused by EIEC, particularly when TMP-SMX resistance is present 4

Critical Clinical Distinction: Rule Out STEC/EHEC

You must differentiate EIEC from Shiga toxin-producing E. coli (STEC/EHEC) before initiating antibiotics. 1, 3

  • For STEC/EHEC: Antibiotics are contraindicated as they increase Shiga toxin production and risk of hemolytic uremic syndrome 1, 3
  • EIEC causes dysentery through mucosal invasion (similar to Shigella), while STEC causes hemorrhagic colitis through toxin production 2, 5
  • EIEC is biochemically atypical (late/no lactose fermentation, lysine decarboxylase negative, non-motile) and shares antigens with Shigella 2

Resistance Considerations

Local resistance patterns should guide initial therapy: 3

  • TMP-SMX resistance is increasing globally; in one study, 30% of Shigella strains and 80% of EIEC strains were TMP-SMX-resistant 4
  • When TMP-SMX-resistant organisms are treated with TMP-SMX, patients have significantly more stools and watery consistency at days 3-5 compared to effective therapy 4
  • Fluoroquinolone resistance is rising in many regions, making azithromycin increasingly valuable 3

Pediatric Considerations

For children with EIEC dysentery:

  • Ceftibuten (oral cephalosporin) for 5 days is effective and well-tolerated 4
  • TMP-SMX at pediatric dosing (5 mg/kg trimethoprim + 25 mg/kg sulfamethoxazole twice daily for 3 days) 1
  • Azithromycin is also appropriate in pediatric patients 3

Common Pitfalls to Avoid

  • Do not withhold antibiotics for EIEC dysentery (unlike STEC where antibiotics are contraindicated) 1
  • Do not use antimotility agents if STEC cannot be ruled out 1
  • Do not assume TMP-SMX susceptibility without testing or knowledge of local resistance patterns 3, 4
  • Do not treat for only 1-2 days; minimum 3-day course is required for adequate eradication 1, 3

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Azithromycin Treatment for Enteropathogenic E. coli Infections

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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