What tests are recommended for STI (Sexually Transmitted Infections) screening?

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STI Screening Tests: Recommended Panel and Approach

Screen all sexually active individuals with nucleic acid amplification tests (NAATs) for chlamydia and gonorrhea, serologic testing for syphilis (both treponemal and non-treponemal), HIV testing, and consider trichomoniasis testing for females—with specimen collection sites determined by sexual practices including pharyngeal, rectal, and urethral sites based on exposure history. 1, 2

Core Testing Panel by Pathogen

Chlamydia and Gonorrhea

  • Use NAATs exclusively—they offer superior sensitivity (86.1%-100%) and specificity (97.1%-100%) compared to traditional culture methods 1, 3
  • For females: vaginal swab NAAT is the preferred specimen 1
  • For males: first-catch urine NAAT is the preferred specimen 1
  • For men who have sex with men (MSM): collect pharyngeal, rectal, AND urethral specimens based on sexual practices (receptive oral sex, receptive anal intercourse, and insertive intercourse respectively) 4, 2
  • Extragenital testing is critical—53% to 100% of pharyngeal and rectal infections are asymptomatic and would be missed with urogenital testing alone 3

Syphilis

  • Requires both treponemal AND non-treponemal serologic tests—never rely on a single positive result 1
  • Traditional approach: start with non-treponemal test (RPR or VDRL), then confirm positive results with treponemal test (TP-PA, enzyme immunoassay, or chemiluminescent immunoassay) 1
  • Reverse sequence screening (treponemal first) is increasingly common but still requires both test types for diagnosis 1

HIV

  • Standard HIV testing per local protocols for all at-risk individuals 1
  • Screen at initiation of STI evaluation, as any STI increases HIV acquisition and transmission risk 4

Trichomoniasis (Females)

  • Vaginal swab NAAT is strongly preferred—wet mount microscopy has poor sensitivity (60-70%) and should be avoided as primary screening 1
  • Do not use Papanicolaou tests for diagnosis due to inadequate sensitivity and specificity 1
  • Consider screening for women with high-risk behaviors rather than universal screening 2

Population-Specific Screening Frequencies

All Sexually Active Women ≤25 Years

  • Annual screening minimum for chlamydia and gonorrhea regardless of reported risk behaviors 4, 2
  • This age group has higher infection rates due to cervical immaturity and more frequent partner changes 5

Women >25 Years

  • Annual screening if risk factors present: multiple partners, new partner, inconsistent condom use, substance use during sex, or sex work 2

Men Who Have Sex with Men (MSM)

  • Annual screening minimum for pharyngeal, rectal, and urethral gonorrhea/chlamydia plus syphilis 4, 2
  • Every 3-6 months if higher risk: multiple or anonymous partners, methamphetamine use, sex in conjunction with drug use, or partners with these behaviors 4, 5, 2

Heterosexual Men

  • Not universally recommended for asymptomatic men 2
  • Consider annual screening in high-prevalence settings (≥2%): jails, juvenile corrections, national job training programs, STD clinics, high school clinics, adolescent clinics 4, 2
  • Screen if high-risk behaviors present: multiple partners, inconsistent condom use, substance use during sex 2

Pregnant Women

  • Universal screening at first prenatal visit for hepatitis B, HIV, and syphilis 5
  • Screen for chlamydia and gonorrhea if <25 years or at increased risk 5
  • Repeat syphilis testing in third trimester and at delivery for high-risk women 5
  • No infant should be discharged without maternal syphilis status determination 5

HIV-Infected Individuals

  • Annual syphilis screening minimum, with testing every 3-6 months for high-risk behaviors 5
  • Screen all HIV-infected women for trichomoniasis 2
  • Comprehensive STI screening at HIV care initiation 2

High-Risk Populations Requiring Frequent Screening (Every 3-6 Months)

  • Commercial sex workers 1
  • Individuals with multiple or anonymous sexual partners 4, 2
  • Sex in conjunction with illicit drug use 4, 2
  • Partners who engage in high-risk behaviors 2
  • History of recent STIs 2
  • Persons who inject drugs (also screen for hepatitis C, even if only once) 5

Post-Treatment Rescreening Protocol

Rescreen ALL individuals 3 months after treatment for chlamydia or gonorrhea, regardless of whether partners were treated—reinfection rates are high and this is non-negotiable 4, 5, 2

  • Consider rescreening females with trichomoniasis at 3 months 4, 2
  • If 3-month rescreening is not possible, retest at next healthcare visit within 12 months 2

Critical Pitfalls to Avoid

  • Never use wet mount microscopy as primary trichomoniasis screening—60-70% sensitivity misses too many infections 1
  • Never diagnose syphilis on a single test—both treponemal and non-treponemal results plus clinical evaluation are required 1
  • Never skip extragenital testing in MSM—the majority of pharyngeal and rectal infections are asymptomatic 3
  • Never delay treatment if clinical suspicion is high—presumptive treatment may be appropriate to prevent ongoing transmission while awaiting results 1
  • Never assume partner treatment occurred—always rescreen at 3 months regardless of reported partner treatment 4, 2

Specimen Collection Based on Sexual Practices

Tailor specimen sites to sexual behavior history, regardless of reported sexual orientation 4:

  • Receptive oral sex: pharyngeal swab 2
  • Receptive anal intercourse: rectal swab 2
  • Insertive vaginal/anal intercourse: urethral specimen (urine for males, vaginal swab for females) 1, 2

References

Guideline

STI Screening Recommendations for Commercial Sex Workers

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

STI Screening Recommendations

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

STD Testing and Treatment Recommendations

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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