SS Genotype and SSRI Treatment for Anxiety
The SS genotype of the serotonin transporter promoter polymorphism (5-HTTLPR) is associated with slower symptom improvement and potentially reduced response to SSRIs, but current evidence does not support routine genetic testing to guide initial SSRI selection for anxiety treatment. 1
Understanding the SS Genotype
The SS genotype refers to having two copies of the short allele at the serotonin transporter promoter region (5-HTTLPR), which results in:
- Lower serotonin transporter expression compared to individuals with long alleles (LL or LS genotypes) 2
- Reduced functional activity of the serotonin transporter protein, the primary target of SSRIs 2
- This genotype occurs in approximately 15-20% of Caucasian populations, with variation across ethnicities 2
Clinical Impact on SSRI Response
Treatment Response Patterns
Patients with the SS genotype demonstrate a selective delay in improvement of specific symptom clusters rather than complete non-response:
- Core depressive symptoms and somatic anxiety symptoms improve more slowly in SS patients compared to LL or LS carriers during the first 6 weeks of SSRI treatment 3
- Other symptom domains (insomnia, motor retardation) show similar improvement rates regardless of genotype 3
- The effect appears to be on the time course of response rather than ultimate treatment failure 3
Evidence Quality and Limitations
The relationship between SS genotype and clinical outcomes remains inconsistent:
- Single-dose pharmacokinetic studies in healthy volunteers show clear genotype-metabolism relationships, but studies in patients on maintenance SSRI doses show mixed results with no consistent association between genotype and drug levels or clinical response 1
- Only five studies have evaluated genotype-clinical response relationships, with conflicting findings—some showing no differences between metabolizer groups, others showing associations only in specific subpopulations 1
- The EGAPP Working Group found insufficient evidence to recommend routine CYP450 or serotonin transporter genetic testing for patients starting SSRI treatment, rating most supporting studies as quality level 3-4 out of 5 1, 4
Practical Clinical Approach
Initial SSRI Selection
Do not alter your initial SSRI choice based solely on SS genotype status:
- Standard first-line SSRIs (sertraline, escitalopram, fluoxetine) remain appropriate initial choices regardless of genotype 4
- The evidence does not support withholding SSRIs or selecting alternative medication classes in SS patients 1
Monitoring and Dose Adjustment Strategy
For patients with known SS genotype, implement closer early monitoring:
- Assess response at 2-3 weeks rather than waiting the standard 4-6 weeks, as SS patients may require longer to show improvement 3
- Evaluate core anxiety and somatic symptoms specifically, as these are most affected by genotype 3
- Consider therapeutic drug monitoring if available, though the relationship between drug levels and genotype in maintenance therapy is inconsistent 1
When to Consider Genotype Information
SS genotype information becomes more clinically relevant in specific scenarios:
- After initial treatment failure or intolerable side effects with one or more SSRIs, though this was not the focus of the primary evidence reviews 1
- In patients with prior paradoxical responses to SSRIs, where the SS genotype may predict anxiogenic effects in some individuals 5
- When choosing between SSRIs, fluoxetine may be preferable as it has less CYP2C19-dependent metabolism compared to citalopram or escitalopram 6
Important Caveats
Multiple confounding factors limit the clinical utility of genotype information:
- Diet, concurrent medications, age, gender, and population stratification all influence SSRI response independent of genotype 1, 2
- Other genetic variations (serotonin receptor polymorphisms, other transporter variants) also affect treatment response but are not captured by 5-HTTLPR testing alone 1
- The SS genotype shows associations with anxiety-related traits and depression vulnerability, but this does not necessarily predict medication response 2
The evidence specifically addresses CYP450 metabolism, not serotonin transporter polymorphisms directly, though both systems influence SSRI pharmacology 1, 4