What is the hospital workup for a patient presenting with fever of unknown origin (FUO) and altered mental status?

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Hospital Workup for Fever of Unknown Origin and Altered Mental Status

When a patient presents with both fever of unknown origin and altered mental status, this is a medical emergency requiring immediate empiric antimicrobial therapy for presumed meningoencephalitis while simultaneously pursuing urgent diagnostic evaluation—do not delay treatment for testing. 1

Immediate Actions (Within 1 Hour)

Initiate empiric antimicrobial therapy immediately with ceftriaxone 2g IV plus vancomycin 15-20 mg/kg IV to cover S. pneumoniae (including resistant strains) and N. meningitidis. 1 Add ampicillin 2g IV every 4 hours if the patient is >50 years old, immunocompromised, or has risk factors for Listeria monocytogenes. 1

Document specific clinical features including:

  • Presence or absence of headache and neck stiffness 1
  • Type and distribution of any rash (petechial rash with meningitis suggests N. meningitidis in 92% of cases) 1
  • Seizure activity 1
  • Signs of shock (hypotension, prolonged capillary refill time) 1

Diagnostic Criteria for Encephalitis

The altered mental status component meets the major criterion for encephalitis if it has lasted ≥24 hours with no alternative cause identified. 2 For probable or confirmed encephalitis, the patient must have ≥3 of the following minor criteria:

  • Documented fever ≥38°C within 72 hours before or after presentation 2
  • Generalized or partial seizures not fully attributable to a preexisting disorder 2
  • New onset focal neurologic findings 2
  • CSF WBC count ≥5/mm³ 2
  • Abnormal brain parenchyma on neuroimaging suggestive of encephalitis 2
  • Abnormal EEG consistent with encephalitis 2

Essential Diagnostic Studies (Do Not Delay Treatment)

Immediate Laboratory Testing:

Blood work (obtain before antibiotics if possible, but do not delay treatment):

  • CBC with differential to assess for leukopenia, thrombocytopenia, or lymphopenia 1
  • Metabolic panel to evaluate for hyponatremia and renal dysfunction 1
  • At least 3 sets of blood cultures 3
  • Glucose level (hypoglycemia is the most common metabolic cause of seizures and altered mental status) 2
  • Inflammatory markers (ESR, CRP) 3, 4

Peripheral blood smear if any travel history exists, as malaria must be diagnosed immediately and is a medical emergency. 5 Treat as malaria until proven otherwise if travel to endemic areas occurred. 5

Lumbar Puncture:

Perform urgently but do not delay antibiotics if LP cannot be done immediately. 1 The LP should be done after antibiotics are started if there are contraindications or delays. 1

CSF analysis should include:

  • Cell count with differential 2
  • Glucose and protein 2
  • Gram stain and bacterial culture 1
  • Consider viral PCR panel (HSV, VZV, enteroviruses) 2

Neuroimaging:

Obtain CT or MRI of the brain to look for:

  • Abnormalities of brain parenchyma suggestive of encephalitis 2
  • Focal lesions or mass effect 1
  • Signs of increased intracranial pressure before LP 1

Critical Differential Diagnoses to Prioritize

Meningococcal Meningitis/Sepsis

Monitor frequently as patients can deteriorate rapidly even if initially appearing well. 1 High-risk features for fatal outcome include rapidly progressing rash, coma, hypotension and shock, lactate >4 mmol/L, low/normal WBC count, low platelets with coagulopathy, and absence of meningitis (sepsis alone). 1

Encephalitis (Viral, Autoimmune, or Other)

West Nile virus should be considered in endemic areas, particularly during mosquito season. 6 HSV encephalitis requires specific antiviral therapy with acyclovir. 2

Rickettsial Diseases (Rocky Mountain Spotted Fever, Ehrlichiosis)

If tick exposure history exists with thrombocytopenia/leukopenia, consider empiric doxycycline 100mg PO/IV twice daily. 1, 5 Early RMSF presentations lack the characteristic rash during the first 2-4 days. 1

Malaria

If travel to endemic areas within the past 2-10 days to several months, assess for severe malaria criteria including altered mental status, parasitemia >5%, severe anemia, renal impairment, hypoglycemia, and metabolic acidosis. 5 Start IV artesunate immediately if severe criteria present. 5

Special Population Considerations

Elderly Patients (>50 years):

Elderly patients are more likely to have altered consciousness and less likely to have neck stiffness or fever. 1 Always add ampicillin for elderly patients due to higher risk for Listeria and pneumococcal disease. 1

Immunocompromised Patients:

May not mount typical inflammatory response; CSF findings can be minimal. 1 Consider broader differential including fungal infections (cryptococcus, histoplasmosis). 1 Add ampicillin to empiric regimen. 1

Advanced Diagnostic Modalities (If Initial Workup Unrevealing)

If the patient stabilizes but diagnosis remains unclear after initial evaluation:

  • [18F]FDG PET/CT has 84-86% sensitivity and 56% diagnostic yield for FUO, and should be performed within 3 days of initiating oral glucocorticoid therapy to avoid false negatives. 3
  • Temporal artery biopsy in patients >55 years old 7
  • Tissue biopsy (liver, lymph node, bone marrow) based on clinical indications has relatively high diagnostic yield 4, 7

Critical Pitfalls to Avoid

Do not withhold empiric antibiotics in patients with altered mental status and fever while awaiting diagnostic studies—mortality increases with delay. 1

Do not use high-dose steroids empirically, as they increase hospital-acquired infection risk, hyperglycemia, GI bleeding, and delirium without improving mortality, and mask inflammatory findings on subsequent imaging. 3

Avoid empiric antibiotics for stable FUO without altered mental status, as they obscure diagnosis and may be harmful if malignancy is present. 3, 4 However, the presence of altered mental status changes this calculus entirely—treat immediately. 1

Do not rely on axillary, tympanic, or temporal artery thermometers for diagnostic purposes; use central, oral, or rectal temperature measurement. 3

References

Guideline

Management of Fever, Rash, and Altered Mental Status

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Diagnostic Approach to Fever of Unknown Origin

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Fever of Unknown Origin in Adults.

American family physician, 2022

Guideline

Approach to Fever and Systemic Symptoms in Middle-Aged Males

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Acute Fever of Unknown Origin: A Presentation of West Nile Encephalitis.

WMJ : official publication of the State Medical Society of Wisconsin, 2022

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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