What is the diagnosis and treatment of celiac disease?

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Diagnosis and Management of Celiac Disease

Diagnostic Approach

The diagnosis of celiac disease requires IgA tissue transglutaminase antibody (tTG-IgA) testing followed by duodenal biopsy confirmation, both performed while the patient is consuming a gluten-containing diet, with treatment consisting of a strict lifelong gluten-free diet. 1, 2

Initial Serologic Testing

  • Order tTG-IgA as the first-line test with simultaneous measurement of total IgA level to identify IgA deficiency (which occurs 10-15 times more frequently in celiac patients and causes false-negative results). 1, 3
  • The patient must be consuming at least 10g of gluten daily for 6-8 weeks before testing—gluten-free or gluten-reduced diets yield false-negative results. 1
  • tTG-IgA has sensitivity of 90-96% and specificity >95%. 1

Confirmatory Serologic Testing

  • If tTG-IgA is >10 times the upper limit of normal, obtain IgA endomysial antibody (EMA-IgA) as confirmatory testing with excellent specificity of 99.6%. 1
  • The combination of tTG-IgA >10x upper limit plus positive EMA-IgA approaches 100% positive predictive value for celiac disease. 1

IgA Deficiency Protocol

  • If IgA is low or absent, use IgG-based tests: IgG deamidated gliadin peptide (DGP-IgG) or IgG tissue transglutaminase (tTG-IgG). 1, 2
  • Do not use IgG-based tests in patients with normal IgA levels—they are markedly less accurate in this setting. 1

Biopsy Confirmation

Upper endoscopy with duodenal biopsy remains mandatory for diagnosis in adults, even with highly positive serology. 4, 1

Biopsy Technique

  • Obtain at least 6 biopsy specimens total: 1-2 from the duodenal bulb and at least 4 from the second part of the duodenum or beyond. 1, 2
  • Taking fewer than 4 biopsies reduces diagnostic yield by 50%. 4
  • Proper orientation of specimens by laboratory technicians is essential for accurate assessment of villous height-to-crypt depth ratio. 4, 2

Histologic Criteria

  • Definitive diagnosis requires villous atrophy (Marsh 3 lesion) combined with positive serology. 4
  • Lesser degrees of damage (≥25 intraepithelial lymphocytes per 100 enterocytes without villous atrophy) plus positive serology may represent "probable celiac disease" and warrant a trial of gluten-free diet. 4
  • Characteristic findings include villous atrophy, crypt hyperplasia, and increased intraepithelial lymphocytes. 1

Exceptions to Biopsy Requirement

  • Biopsy may be deferred in patients with coagulation disorders or during pregnancy. 4
  • In children (not adults) with tTG-IgA ≥10x upper limit, positive EMA-IgA, and positive HLA-DQ2/DQ8, biopsy may be avoided. 1

HLA Testing

HLA-DQ2 and HLA-DQ8 testing has >99% negative predictive value—absence of both alleles essentially rules out celiac disease. 4, 1

Indications for HLA Testing

  • Celiac disease strongly suspected despite negative serology. 4, 1
  • Equivocal small bowel histologic findings. 4
  • Patients already on gluten-free diet who were never properly tested. 4, 1
  • First-degree relatives with Down syndrome. 4
  • Discrepant serology and histology results. 4

Differential Diagnosis of Villous Atrophy

When biopsy shows villous atrophy but serology is negative, consider these alternative diagnoses:

Medication-Induced

  • Olmesartan, NSAIDs, mycophenolate mofetil, chemotherapy. 4, 2

Infectious Causes

  • Giardiasis (common), Helicobacter pylori gastritis, small intestinal bacterial overgrowth, tropical sprue, HIV, Whipple's disease. 4, 2

Autoimmune Disorders

  • Autoimmune enteropathy, common variable immunodeficiency, systemic lupus erythematosus, Sjögren's syndrome. 4

Other Causes

  • Crohn's disease, eosinophilic gastroenteritis, lymphoma, post-infectious enteropathy. 4, 2

Treatment

Initiate a strict, lifelong gluten-free diet immediately after biopsy confirmation. 4, 2

Initial Management

  • Refer to a registered dietitian experienced in celiac disease management for comprehensive dietary education. 4, 1, 2
  • Screen for nutritional deficiencies (iron, folate, vitamin D, calcium, vitamin B12). 2
  • Evaluate for associated autoimmune conditions (type 1 diabetes, autoimmune thyroid disease, autoimmune liver disease). 2

Follow-Up Protocol

  • Perform follow-up serology at 6 months, 12 months, then yearly thereafter. 1
  • Negative serology after treatment does not guarantee intestinal mucosal healing. 1
  • Persistently positive serology usually indicates ongoing intestinal damage from continued gluten exposure. 1

Management of Persistent Symptoms

In patients with persistent or relapsing symptoms, perform repeat endoscopic biopsies to determine healing status, even if tTG-IgA is negative. 1

  • Review the original diagnosis to exclude alternative diagnoses. 5
  • Conduct dietary review to ensure no obvious gluten contamination. 5
  • Evaluate for complications: refractory celiac disease, enteropathy-associated lymphoma, microscopic colitis, pancreatic exocrine dysfunction. 5

High-Risk Groups Requiring Screening

Screen asymptomatic individuals from these high-risk groups, as celiac disease frequently occurs without gastrointestinal symptoms:

  • First-degree relatives (7.5% risk). 1, 3
  • Type 1 diabetes mellitus (5-10% prevalence). 1, 3
  • Autoimmune thyroid disease. 1, 3
  • Down syndrome or Turner syndrome. 1, 3
  • Unexplained iron deficiency anemia. 1
  • Premature osteoporosis. 1
  • Unexplained liver transaminase elevations. 1
  • Autoimmune liver disease. 3

Critical Pitfalls to Avoid

Pre-Diagnostic Errors

  • Never initiate a gluten-free diet before completing diagnostic workup—this leads to false-negative serology and inconclusive biopsies. 1, 2
  • For patients already on gluten-free diet, resume normal diet with three slices of wheat bread daily for 1-3 months (sometimes up to several years) before repeat testing. 1

Testing Errors

  • Do not rely solely on serology without biopsy confirmation in adults—this leads to misdiagnosis. 1
  • Do not use IgG-based tests in patients with normal IgA levels—they lack specificity in this setting. 1
  • Do not perform HLA testing routinely—it should be reserved for specific clinical scenarios outlined above. 4

Biopsy Errors

  • Taking fewer than 4 biopsy specimens reduces diagnostic accuracy by 50%. 4
  • Failure to biopsy the duodenal bulb misses patchy disease distribution. 1
  • In patients with persistently positive serology but normal duodenal mucosa, consider repeat biopsy including jejunal specimens, as the lesion may be present only in the jejunum. 4

Diagnostic Confusion

  • Seronegative celiac disease can occur and requires biopsy for diagnosis. 1
  • Lymphocytic infiltration without villous atrophy is not specific for celiac disease—most patients with lymphocytic duodenosis do not have celiac disease. 4
  • Improvement of symptoms on gluten-free diet or exacerbation with gluten reintroduction has very low positive predictive value and should not be used for diagnosis without other supportive evidence. 4

Clinical Presentation Spectrum

  • Celiac disease affects approximately 1% of the population, but only 24% are diagnosed—creating a "celiac iceberg" of undiagnosed cases. 3
  • Many patients present with only extraintestinal manifestations or remain completely asymptomatic ("silent celiac disease"). 3
  • Left undiagnosed and untreated, even asymptomatic celiac disease leads to higher risk of osteoporosis, infertility, and small bowel cancer. 3

References

Guideline

Celiac Disease Diagnosis and Management

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Diagnosis and Management of Celiac Disease

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Celiac Disease Diagnosis and Management

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

ACG clinical guidelines: diagnosis and management of celiac disease.

The American journal of gastroenterology, 2013

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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