What is the diagnosis code for severe vitamin D deficiency?

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ICD-10 Diagnosis Code for Severe Vitamin D Deficiency

The ICD-10 diagnosis code for severe vitamin D deficiency is E55.9 (Vitamin D deficiency, unspecified), or more specifically E55.0 (Rickets, active) if rickets is present, or M83.9 (Adult osteomalacia, unspecified) if osteomalacia has developed.

Understanding Severe Vitamin D Deficiency

Severe vitamin D deficiency is clinically defined as serum 25-hydroxyvitamin D [25(OH)D] levels below 10-12 ng/mL (25-30 nmol/L), which dramatically increases the risk for osteomalacia and nutritional rickets. 1

  • This threshold represents the level at which classic vitamin D deficiency diseases manifest with visible skeletal changes and metabolic bone disease 1
  • Levels below 20 ng/mL (50 nmol/L) are considered deficient, while 20-30 ng/mL represents insufficiency 2, 3, 4
  • Severe deficiency below 12 ng/mL increases risk of excess mortality, infections, and many other diseases 4

Clinical Coding Considerations

Primary ICD-10 Codes

  • E55.9 is the most commonly used code for vitamin D deficiency when no specific manifestation is documented 5
  • E55.0 should be used when active rickets is present in children 1, 2
  • M83.9 is appropriate when adult osteomalacia has developed as a consequence of severe deficiency 1

Supporting Documentation Requirements

  • Document the actual 25(OH)D level in ng/mL or nmol/L to justify the "severe" designation 1, 5
  • Note any clinical manifestations such as symmetric low back pain, proximal muscle weakness, muscle aches, or throbbing bone pain over sternum or tibia 3
  • Record any secondary hyperparathyroidism, which develops progressively as levels fall below 20 ng/mL and worsens with severe deficiency 5, 6

Important Clinical Context

When Inflammation Complicates Diagnosis

  • Plasma vitamin D levels are significantly reduced when C-reactive protein (CRP) exceeds 40 mg/L, complicating interpretation 1
  • Nearly all vitamin D values fall below reference ranges in the presence of significant inflammation, regardless of true nutritional status 1
  • Consider timing of sample collection and influence of acute illness when documenting deficiency 1

Risk Factors to Document

  • Severe kidney or liver dysfunction increases deficiency risk 1
  • Bed-ridden and chronically ill patients are at high risk 1
  • Malabsorption syndromes (post-bariatric surgery, inflammatory bowel disease, celiac disease) require documentation 5
  • Dark skin pigmentation is associated with 2-9 times higher prevalence of low vitamin D levels 5
  • Obesity causes vitamin D sequestration in adipose tissue 5, 6

Common Coding Pitfalls to Avoid

  • Do not use codes for active vitamin D analogs (calcitriol) deficiency - these are different conditions requiring different ICD-10 codes 5
  • Avoid coding as "unspecified" when specific manifestations like rickets or osteomalacia are present - use the more specific codes E55.0 or M83.9 1
  • Do not confuse vitamin D deficiency with secondary hyperparathyroidism - while related, hyperparathyroidism requires its own code (E21.1) in addition to the vitamin D deficiency code 5
  • Document whether deficiency is nutritional versus due to malabsorption - this affects treatment approach and may require additional diagnosis codes 5

Treatment Implications for Coding

  • Severe deficiency typically requires loading doses of 50,000 IU weekly for 8-12 weeks, which should be documented in the treatment plan 5, 3
  • Follow-up 25(OH)D levels after 3-6 months are necessary to confirm adequate response and may affect ongoing coding 1, 5
  • Target level of at least 30 ng/mL for anti-fracture efficacy should be documented as treatment goal 5

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Vitamin D insufficiency: Definition, diagnosis and management.

Best practice & research. Clinical endocrinology & metabolism, 2018

Research

Recognition and management of vitamin D deficiency.

American family physician, 2009

Research

Vitamin D deficiency 2.0: an update on the current status worldwide.

European journal of clinical nutrition, 2020

Guideline

Vitamin D Insufficiency Treatment Guidelines

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Timeframe for Developing Severe Vitamin D Deficiency

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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