What is the comprehensive workup for Polycystic Ovary Syndrome (PCOS)?

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PCOS Workup

The comprehensive workup for PCOS requires documenting two of three Rotterdam criteria: hyperandrogenism (clinical or biochemical), ovulatory dysfunction, and polycystic ovarian morphology, with total testosterone and free testosterone as first-line biochemical tests measured by LC-MS/MS, and transvaginal ultrasound showing ≥20 follicles per ovary or ovarian volume >10 mL in adults. 1, 2

Clinical History and Physical Examination

Essential History Components

  • Menstrual history: Cycle length >35 days indicates chronic anovulation; cycles 32-35 days require assessment for ovulatory dysfunction 2, 3
  • Onset and duration of androgen excess signs: Gradual onset with weight gain suggests PCOS; rapid onset with clitoromegaly suggests virilizing tumor 2, 3
  • Medication review: Document use of exogenous androgens or hormonal contraceptives 2
  • Family history: Cardiovascular disease and diabetes 2
  • Lifestyle factors: Diet, exercise, alcohol use, smoking 2

Physical Examination Findings

  • Hyperandrogenism signs: Hirsutism (use Ferriman-Gallwey score), acne (severe or isotretinoin-resistant acne has 40% PCOS likelihood), androgenic alopecia (vertex/crown/diffuse pattern), clitoromegaly 2, 3
  • Anthropometric measurements: BMI and waist-hip ratio (central obesity is primary mediator of PCOS complications) 2, 4
  • Signs suggesting alternative diagnoses: Buffalo hump, moon facies, hypertension, abdominal striae (Cushing's syndrome) 2

Laboratory Testing

First-Line Androgen Assessment

Total testosterone (TT) is the single best initial test with 74% sensitivity and 86% specificity 1, 5:

  • Must use LC-MS/MS method (not direct immunoassay) for superior accuracy: 92% specificity vs 78% with immunoassay 1, 5
  • Direct immunoassays are inaccurate at low female testosterone ranges and should be rechecked by LC-MS/MS if inconsistent with clinical presentation 1

Free testosterone (FT) has highest sensitivity at 89% with 83% specificity 1, 5:

  • Calculate using Vermeulen equation from high-quality TT and SHBG measurements, OR measure by equilibrium dialysis or ammonium sulfate precipitation 1, 2
  • Direct FT immunoassays are highly inaccurate due to low serum concentrations and should never be used 1

Free Androgen Index (FAI) has 78% sensitivity and 85% specificity 1, 5:

  • Calculated as: (Total Testosterone / SHBG) × 100 1, 2
  • Caution when SHBG <30 nmol/L as FAI becomes less reliable 2

Second-Line Androgen Tests (If TT/FT Not Elevated and Clinical Suspicion High)

Androstenedione (A4): 75% sensitivity, 71% specificity; particularly useful when SHBG is low 1, 2

DHEAS: 75% sensitivity, 67% specificity; most reliable for adrenal androgen production, particularly valuable in women <30 years 1, 2

Differential Diagnosis Laboratory Tests

  • 17-hydroxyprogesterone (early morning): Rule out non-classic congenital adrenal hyperplasia 2, 3
  • TSH: Exclude thyroid disease 2
  • Prolactin: Rule out hyperprolactinemia 2
  • 24-hour urinary free cortisol or overnight dexamethasone suppression test: If Cushing's syndrome suspected 2

Metabolic Screening (All PCOS Patients)

  • Fasting glucose and 2-hour oral glucose tolerance test: Screen for type 2 diabetes and impaired glucose tolerance 2, 5
  • Fasting lipid panel: Screen for dyslipidemia 2
  • Consider HbA1c for ongoing diabetes surveillance 2

Imaging Assessment

Transvaginal Ultrasound (Adults ≥18 Years)

Technical requirements: Use ≥8 MHz transducer frequency for optimal resolution 1, 2

Gold standard marker - Follicle Number Per Ovary (FNPO): ≥20 follicles (2-9 mm diameter) has 87.64% sensitivity and 93.74% specificity 1, 2, 5

Alternative markers when accurate follicle counting impossible:

  • Ovarian volume (OV) >10 mL: Comparable diagnostic accuracy to FNPO 1, 2
  • Follicle Number Per Single cross-section (FNPS): Secondary alternative 1, 2

Additional findings to document: Presence of dominant follicle, corpus luteum, increased central stromal echogenicity (subjective but sensitive/specific sign) 1, 6

Imaging in Adolescents (<20 Years, <8 Years Post-Menarche)

Do NOT use ultrasound as first-line diagnostic tool due to poor specificity and high false-positive rates from normal multi-follicular ovaries 1, 2, 5

  • Diagnosis relies on persistent oligomenorrhea 2-3 years beyond menarche PLUS biochemical/clinical hyperandrogenism 2, 3

Alternative Imaging

MRI pelvis without contrast: Consider in obese patients when transvaginal ultrasound unacceptable and transabdominal ultrasound limited; provides reproducible ovarian volume but only moderate interobserver agreement for follicle counts 1

Emerging Biomarkers

Anti-Müllerian Hormone (AMH): Significantly elevated in PCOS but lacks standardization across assays and established diagnostic cut-offs; not yet recommended for routine clinical use 1, 2

Diagnostic Algorithm

  1. Document clinical hyperandrogenism (hirsutism, acne, alopecia) and/or biochemical hyperandrogenism (TT and FT by LC-MS/MS as first-line; consider A4/DHEAS if negative with high suspicion) 1, 2

  2. Confirm ovulatory dysfunction (menstrual cycles >35 days or irregular cycles 2-3 years post-menarche in adolescents) 2, 3

  3. Assess polycystic ovarian morphology (transvaginal ultrasound with FNPO ≥20 or OV >10 mL in adults; avoid ultrasound in adolescents) 1, 2

  4. Exclude mimics (17-OHP for CAH, TSH for thyroid disease, prolactin for hyperprolactinemia, consider Cushing's workup if rapid-onset severe hyperandrogenism) 2, 3

  5. Screen for metabolic complications (OGTT, lipid panel) in all confirmed PCOS patients 2, 5

Critical Pitfalls to Avoid

  • Never rely on direct immunoassays for testosterone measurement - they have poor accuracy at female ranges and will miss cases or create false positives 1, 5
  • Do not use ultrasound in adolescents <8 years post-menarche as primary diagnostic criterion - normal pubertal ovaries appear polycystic 2, 3
  • Do not diagnose PCOS without excluding other causes of hyperandrogenism and menstrual irregularity 2, 3
  • FAI becomes unreliable when SHBG <30 nmol/L - use alternative androgen markers 2
  • Transabdominal ultrasound is inadequate for accurate follicle counting - use only for ovarian volume when transvaginal approach impossible 1

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Diagnostic Criteria and Treatment Options for Polycystic Ovary Syndrome (PCOS)

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Diagnostic Workup for Polycystic Ovary Syndrome (PCOS)

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Polycystic ovarian syndrome: role of imaging in diagnosis.

Radiographics : a review publication of the Radiological Society of North America, Inc, 2012

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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