What is the recommended treatment for a candidiasis (fungal infection) urinary tract infection (UTI)?

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Treatment of Candida Urinary Tract Infection

For symptomatic Candida UTI, oral fluconazole 200 mg (3 mg/kg) daily for 2 weeks is the first-line treatment for fluconazole-susceptible organisms, combined with removal of urinary catheters when feasible. 1

Initial Assessment and Catheter Management

Remove or replace indwelling urinary catheters immediately if feasible—this alone resolves candiduria in approximately 50% of cases. 1, 2

  • Asymptomatic candiduria does NOT require antifungal treatment in most patients, as it typically represents colonization rather than infection 1, 3
  • Treatment of asymptomatic candiduria is indicated ONLY for: neutropenic patients, very low-birth-weight infants, or patients undergoing urologic procedures 1, 2, 3
  • For patients with nephrostomy tubes or stents, consider removal or replacement if feasible 1

Treatment Algorithm for Symptomatic Cystitis (Lower UTI)

First-Line Therapy for Fluconazole-Susceptible Species

  • Fluconazole 200 mg (3 mg/kg) orally daily for 2 weeks 1, 2
  • Fluconazole is preferred because it achieves high urinary concentrations, has both oral and IV formulations, and demonstrated 82% efficacy in randomized controlled trials 4, 3

Alternative Therapy for Fluconazole-Resistant C. glabrata

  • Amphotericin B deoxycholate 0.3–0.6 mg/kg IV daily for 1–7 days 1
  • OR Flucytosine 25 mg/kg orally 4 times daily for 7–10 days 1
  • Amphotericin B bladder irrigation (50 mg/L sterile water daily for 5 days) may be useful but has high recurrence rates 1, 4

Treatment for C. krusei

  • Amphotericin B deoxycholate 0.3–0.6 mg/kg IV daily for 1–7 days 1
  • C. krusei exhibits intrinsic resistance to fluconazole 5

Treatment Algorithm for Pyelonephritis (Upper UTI)

  • Fluconazole 200–400 mg (3–6 mg/kg) orally daily for 2 weeks 1
  • Use the higher dose range (400 mg) for more severe upper tract infections 2
  • For fluconazole-resistant C. glabrata: Amphotericin B deoxycholate 0.3–0.6 mg/kg IV daily for 1–7 days with or without flucytosine 25 mg/kg orally 4 times daily 1
  • Elimination of urinary tract obstruction is mandatory 1

Critical Pitfalls to Avoid

  • Do NOT use echinocandins (caspofungin, micafungin, anidulafungin) for lower urinary tract infections—they achieve minimal urinary concentrations and are generally ineffective for Candida UTI 6, 4, 7
  • Do NOT use lipid formulations of amphotericin B—they do not achieve adequate urine concentrations 6
  • Do NOT use other azoles besides fluconazole (itraconazole, voriconazole, posaconazole) for lower UTI—they have minimal urinary excretion 6, 7
  • Colony counts cannot reliably differentiate colonization from infection, especially with catheters present 4

Special Considerations for Urologic Procedures

  • For patients undergoing urologic procedures with candiduria: Fluconazole 400 mg (6 mg/kg) daily OR amphotericin B deoxycholate 0.3–0.6 mg/kg daily for several days before and after the procedure 1, 6, 4
  • This prevents candidemia, which occurs at high rates when urinary tract instrumentation is performed in patients with candiduria 1

Duration of Therapy

  • Standard duration is 2 weeks for uncomplicated cystitis and pyelonephritis 1, 2
  • Continue treatment until symptoms resolve and urine cultures no longer yield Candida species 2, 6
  • Recent evidence suggests shorter durations (median 7 days) may be equally effective, with one study showing no difference in clinical success between 7-day and 14-day courses (93.1% vs 93.3%, P=1.000) 8
  • For neutropenic patients who remain persistently neutropenic, longer courses may be warranted pending resolution of neutropenia 1

Management of Fungus Balls and Complicated Infections

  • Surgical intervention is mandatory for fungus balls, combined with antifungal therapy as outlined above 1
  • Irrigation through nephrostomy tubes with amphotericin B deoxycholate 25–50 mg in 200–500 mL sterile water can be useful as adjunctive therapy 1
  • Obtain imaging if treatment failure occurs despite appropriate therapy, or if fungus balls, hydronephrosis, abscesses, or structural abnormalities are suspected 2

Monitoring and Follow-Up

  • Monitor for clinical improvement and obtain follow-up urine cultures to confirm clearance of infection 6
  • For persistent infection despite appropriate therapy, imaging is indicated to rule out anatomical abnormalities or fungus balls 2, 6
  • Candiduria does not commonly lead to candidemia, and treatment does not change mortality rates in most patients—candiduria is primarily a marker of underlying illness severity 1

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Treatment of Candida tropicalis UTI

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Candida urinary tract infections in adults.

World journal of urology, 2020

Guideline

Treatment of Urine Candida Infection

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Treatment of Candida Lusitaniae Urinary Tract Infection

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Candida urinary tract infections--treatment.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2011

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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