What is the recommended treatment for Mycoplasma genitalium?

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Treatment for Mycoplasma genitalium

The recommended first-line treatment is azithromycin 500 mg orally on day 1, followed by 250 mg orally once daily for days 2-5, which achieves 93-99% cure rates while minimizing macrolide resistance development. 1, 2, 3

Diagnostic Testing Before Treatment

  • Confirm M. genitalium infection using nucleic acid amplification testing (NAAT) before initiating therapy, as this is the only reliable diagnostic method available 1, 4
  • Test simultaneously for gonorrhea and chlamydia, since co-infections are common and require different treatment approaches 1, 2
  • When available, perform macrolide resistance testing to guide therapy selection, as resistance rates have increased dramatically (from 0% in 2006-2007 to 18% by 2011 in some populations) 5, 4, 6

First-Line Treatment Algorithm

For macrolide-susceptible or unknown resistance status:

  • Azithromycin 500 mg orally on day 1, then 250 mg orally daily for days 2-5 1, 2, 3, 4
  • This extended azithromycin regimen achieves 95-99% cure rates and does NOT select for macrolide resistance, unlike single-dose azithromycin 5

Critical pitfall to avoid: Do NOT use azithromycin 1 g as a single dose—while it achieves 85-95% cure rates, it selects for macrolide resistance in 100% of treatment failures 5, 7

Doxycycline should NOT be used as monotherapy for confirmed M. genitalium, as it achieves only 30-40% cure rates 2, 3, 4, 7

Second-Line Treatment (Treatment Failure or Macrolide Resistance)

For macrolide-resistant infections or treatment failure:

  • Moxifloxacin 400 mg orally once daily for 7 days (10 days for complicated infections like PID or epididymitis) 3, 4, 6
  • Note that moxifloxacin resistance is increasing, making resistance-guided therapy increasingly important 4

Alternative approach when resistance testing unavailable:

  • Doxycycline 100 mg orally twice daily for 7 days, followed by azithromycin 1 g on day 1, then 500 mg daily for 3 days 6
  • This sequential therapy may reduce organism load and decrease resistance selection 4, 6

Third-Line Options for Persistent Infection

  • Doxycycline or minocycline 100 mg orally twice daily for 14 days may cure 40-70% of persistent infections 4
  • Pristinamycin 1 g orally four times daily for 10 days achieves approximately 75-90% cure rates 3, 4

Patient Instructions and Partner Management

  • Patients must abstain from sexual intercourse for 7 days after completing single-dose therapy or until completion of multi-day regimens 1, 2
  • All sexual partners require evaluation and treatment, even if asymptomatic, to prevent reinfection 1, 2
  • Dispense medications on-site when possible and directly observe the first dose to maximize compliance 8

Follow-Up Requirements

  • Patients should return for evaluation if symptoms persist or recur, as this indicates treatment failure requiring resistance testing and alternative therapy 1
  • Test-of-cure should be performed 3 weeks after completion of therapy in cases of treatment failure or when compliance is uncertain 6
  • Repeat testing at 3-6 months is recommended due to high reinfection rates 1

Important caveat: Testing at less than 3 weeks after therapy completion may yield false-positive results with NAAT due to detection of non-viable organisms 8

References

Guideline

Treatment for Mycoplasma genitalium

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Treatment of Mycoplasma genitalium and Ureaplasma Infections

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

2016 European guideline on Mycoplasma genitalium infections.

Journal of the European Academy of Dermatology and Venereology : JEADV, 2016

Research

2021 European guideline on the management of Mycoplasma genitalium infections.

Journal of the European Academy of Dermatology and Venereology : JEADV, 2022

Research

A randomized comparison of azithromycin and doxycycline for the treatment of Mycoplasma genitalium-positive urethritis in men.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2009

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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