What is the role of calprotectin in assessing intestinal inflammation, particularly in distinguishing between inflammatory bowel disease (IBD) and irritable bowel syndrome (IBS)?

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Last updated: December 19, 2025View editorial policy

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Calprotectin: Role in Assessing Intestinal Inflammation

Fecal calprotectin is an excellent non-invasive biomarker for distinguishing inflammatory bowel disease (IBD) from irritable bowel syndrome (IBS), with a sensitivity of 90.6% at cutoffs >50 μg/g and high negative predictive value for ruling out IBD in symptomatic patients. 1

Diagnostic Utility: IBD vs IBS Differentiation

Calprotectin reliably separates organic inflammation from functional disorders:

  • Normal levels (<50 μg/g) have high negative predictive value for IBD, effectively ruling out inflammatory disease in undiagnosed symptomatic patients 1
  • Calprotectin levels are markedly elevated in IBD patients (median 175-465 μg/g) compared to IBS patients (median 54 μg/g), making it highly effective at distinguishing these conditions 2, 3
  • The test consistently differentiates IBD from IBS because IBS patients maintain low calprotectin levels despite similar symptom profiles 4, 5

Threshold Interpretation and Clinical Action

The specific calprotectin level determines your next clinical step:

Levels <100 μg/g

  • Suggests IBS is likely; IBD effectively ruled out 1
  • Manage as functional disorder in primary care without gastroenterology referral 1

Levels 100-250 μg/g (Intermediate Range)

  • Consider repeat testing in 2-3 weeks or routine gastroenterology referral based on symptom severity 1
  • This range has moderate specificity (66%) for active endoscopic inflammation 6
  • Represents 8% risk of developing IBD over 12 months compared to 1% with levels <50 μg/g 7

Levels >250 μg/g

  • Urgent gastroenterology referral required 1
  • Provides 82% specificity for differentiating active IBD from remission 6
  • Strongly indicates need for colonoscopy with biopsies 1

Monitoring Disease Activity in Known IBD

Calprotectin correlates closely with endoscopic inflammation and guides treatment decisions:

  • A cutoff of 50 μg/g provides 90.6% sensitivity for detecting endoscopically active disease 6, 1
  • Levels >100 μg/g provide 78.2% specificity for active inflammation 6
  • In patients with moderate to severe symptoms, calprotectin >150 μg/g reliably suggests moderate to severe endoscopic inflammation and can guide treatment escalation without immediate endoscopy 1, 8
  • In patients with mild symptoms and calprotectin >150 μg/g, endoscopic assessment is recommended rather than empiric treatment adjustment 1, 8
  • Serial monitoring every 3-6 months in asymptomatic IBD patients facilitates early recognition of impending flares 1, 8

Calprotectin predicts clinical outcomes:

  • Clinically inactive disease with raised calprotectin predicts future relapse 6, 1
  • Levels <150 μg/g suggest minimal inflammation and can reliably exclude active disease in asymptomatic patients 1
  • The biomarker provides objective evidence of mucosal healing, which has become a treatment goal in IBD 3

Critical Limitations and Confounding Factors

Calprotectin is sensitive but not specific—multiple conditions elevate levels:

  • NSAID use within the past 6 weeks significantly elevates calprotectin through direct mucosal injury; repeat testing after cessation is appropriate 1, 7
  • Colorectal cancer and advanced adenomas elevate calprotectin, making it inappropriate for patients with alarm features (rectal bleeding with abdominal pain, change in bowel habit, weight loss, iron-deficiency anemia)—these patients require cancer pathway referral regardless of calprotectin level 6, 1
  • Infectious gastroenteritis causes transient elevation 1, 7
  • Hemorrhoids can cause false elevations due to local bleeding and inflammation 1, 7
  • Untreated celiac disease elevates calprotectin through intestinal inflammation 7

Practical Collection and Testing Considerations

Proper specimen handling is essential for accurate results:

  • Use the first stool passed in the morning routinely 6, 1
  • Store samples no more than 3 days at room temperature before analysis 6, 1
  • Variability exists between different assays and in levels throughout the day 6

Essential Workup Before or Concurrent with Gastroenterology Referral

Complete these baseline tests when calprotectin is elevated:

  • Complete blood count (assess for anemia, thrombocytosis indicating inflammation) 1
  • C-reactive protein (complementary inflammatory marker, though 20% of active Crohn's patients have normal CRP) 1
  • Celiac serology (tissue transglutaminase antibodies) to exclude celiac disease 1, 7
  • Stool culture to exclude infectious causes 1
  • Urea and electrolytes if diarrhea is prominent 1

When Calprotectin Should NOT Be Used

Avoid calprotectin testing in these scenarios:

  • Patients with alarm features (rectal bleeding with abdominal pain, change in bowel habit, weight loss, iron-deficiency anemia) require direct cancer pathway referral and colonoscopy 6, 1
  • When IBD relapse is clinically obvious, measurement is unnecessary—proceed directly to treatment 6
  • Calprotectin is not sensitive enough to exclude advanced colorectal adenoma or colorectal carcinoma 6, 1

References

Guideline

Calprotectin as a Biomarker for Intestinal Inflammation

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Elevated Calprotectin Levels: Causes and Next Steps

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Fecal Calprotectin Guidance

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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