What are the symptoms and treatment options for Small Intestinal Bacterial Overgrowth (SIBO)?

Medical Advisory BoardAll articles are reviewed for accuracy by our Medical Advisory Board
Educational purpose only • Exercise caution as content is pending human review
Article Review Status
Submitted
Under Review
Approved

Last updated: April 7, 2025View editorial policy

Personalize

Help us tailor your experience

Which best describes you? Your choice helps us use language that's most understandable for you.

From the Guidelines

Small intestinal bacterial overgrowth (SIBO) should be treated with a 7-14 day course of antibiotics such as rifaximin (550 mg three times daily), as it is often the first choice if available on the local drug formulary 1.

Treatment Overview

The treatment of SIBO typically involves the use of antibiotics to reduce the bacterial load in the small intestine.

  • The choice of antibiotic may include rifaximin, metronidazole, or ciprofloxacin, among others, with rifaximin being a preferred option due to its efficacy and low absorption rate 1.
  • For recurrent cases, cyclical antibiotic therapy or rotating different antibiotics may be necessary to prevent the development of antibiotic resistance 1.
  • It is also important to address underlying conditions that may predispose to SIBO, such as diabetes, scleroderma, or anatomical abnormalities.

Dietary Modifications

Dietary modifications can also play a crucial role in managing SIBO.

  • A low FODMAP diet, which reduces fermentable carbohydrates that feed bacteria, may be beneficial in reducing symptoms of SIBO [@Example@].
  • Prokinetic agents like low-dose erythromycin (50-100 mg at bedtime) can help with intestinal motility issues that contribute to SIBO [@Example@].

Antibiotic Therapy

The use of antibiotics in SIBO treatment is supported by recent guidelines, which recommend sequential antibiotic therapy to treat intestinal bacterial overgrowth and reduce malabsorption 1.

  • Poorly absorbable antibiotics such as aminoglycosides and rifaximine are preferred, but alternating cycles with metronidazole and tetracycline may be necessary to limit resistance 1.
  • The most commonly used antibiotics in clinical practice are metronidazole, amoxicillin-clavulanate, doxycycline, and norfloxacine 1.

Quality of Life and Morbidity

The goal of SIBO treatment is to improve quality of life and reduce morbidity by alleviating symptoms such as bloating, diarrhea, abdominal pain, and malnutrition.

  • Treatment of SIBO can also improve nutritional status and reduce the risk of life-threatening bacterial translocation 1.
  • After treatment, probiotics may help restore normal gut flora, though evidence for their effectiveness is mixed [@Example@].

From the FDA Drug Label

The trials examined a composite endpoint which defined responders by IBS-related abdominal pain and stool consistency measures Patients were monthly responders if they met both of the following criteria: • experienced a ≥30% decrease from baseline in abdominal pain for ≥2 weeks during the month following 2 weeks of treatment • had a weekly mean stool consistency score <4 (loose stool) for ≥2 weeks during the month following 2 weeks of treatment

The FDA drug label does not answer the question about small intestinal bacterial overgrowth.

From the Research

Small Intestinal Bacterial Overgrowth Treatment

  • Rifaximin is a broad-spectrum non-absorbable antibiotic used for the treatment of small intestinal bacterial overgrowth (SIBO) 2, 3, 4.
  • Studies have shown that rifaximin is effective in eradicating SIBO, with a decontamination rate of 60-80% 2, 3, 4.
  • The efficacy of rifaximin has been compared to other antibiotics, such as metronidazole, and has been found to have a higher eradication rate and better tolerability 3.
  • A systematic review and meta-analysis found that rifaximin has an overall eradication rate of 70.8% and is safe for the treatment of SIBO 4.

Alternative Treatment Approaches

  • Alternative therapies, such as probiotics, therapeutic diets, and herbal medicines, have been used to individualize SIBO management, particularly in recalcitrant cases 5.
  • A systematic review found preliminary evidence for the role of alternative therapies in the treatment of SIBO, but robust clinical trials are lacking 5.
  • Probiotics, therapeutic diets, and herbal medicines have been studied as potential treatments for SIBO, but more research is needed to determine their effectiveness 5.

Treatment of SIBO in Specific Populations

  • SIBO is common in patients with systemic sclerosis (SSc), occurring in 30-60% of patients, and can lead to malnutrition and impaired quality of life 6.
  • A systematic review found that antibiotics, such as ciprofloxacin, rifaximin, and metronidazole, can eradicate SIBO in some SSc patients, but more research is needed to determine the effectiveness of these treatments 6.
  • There is a paucity of data on the effectiveness of prokinetics or probiotics in SSc patients with SIBO 6.

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Antibiotic therapy in small intestinal bacterial overgrowth: rifaximin versus metronidazole.

European review for medical and pharmacological sciences, 2009

Research

Alternative Treatment Approaches to Small Intestinal Bacterial Overgrowth: A Systematic Review.

Journal of alternative and complementary medicine (New York, N.Y.), 2021

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

Have a follow-up question?

Our Medical A.I. is used by practicing medical doctors at top research institutions around the world. Ask any follow up question and get world-class guideline-backed answers instantly.