What is the recommended treatment for Mycoplasma genitalium infections?

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Last updated: December 22, 2025View editorial policy

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Treatment for Mycoplasma genitalium Infections

For confirmed M. genitalium infection without known macrolide resistance, treat with azithromycin 500 mg orally on day 1, followed by 250 mg daily on days 2-5, which achieves 93-99% cure rates while minimizing resistance development. 1

Diagnostic Testing Before Treatment

  • Perform nucleic acid amplification testing (NAAT) to confirm M. genitalium infection before initiating therapy 1
  • Test simultaneously for gonorrhea and chlamydia, as co-infections are common and require different treatment approaches 1, 2
  • Testing for macrolide resistance mutations should be performed when available, as this guides therapy selection 3

First-Line Treatment Algorithm

For macrolide-susceptible or unknown resistance status:

  • Azithromycin 500 mg orally on day 1, then 250 mg orally daily on days 2-5 achieves 95-99% cure rates 1, 4
  • This extended dosing regimen is superior to single-dose azithromycin 1g, which has only 84-91% cure rates and promotes macrolide resistance development in 100% of treatment failures 5, 6

Critical pitfall to avoid: Do not use azithromycin 1g single dose as first-line therapy, despite it appearing in some older recommendations 2. This regimen selects for macrolide resistance in all treatment failures 5 and has significantly lower cure rates than the extended 5-day regimen 1, 3.

Second-Line Treatment

For macrolide-resistant infections or treatment failures:

  • Moxifloxacin 400 mg orally once daily for 7 days for uncomplicated infections 3, 7
  • Moxifloxacin 400 mg orally once daily for 14 days for complicated infections (PID, epididymitis) 3, 7
  • Moxifloxacin historically achieved 96-100% cure rates, but efficacy has declined to 89% since 2010 due to emerging fluoroquinolone resistance 8

Third-Line Options for Persistent Infection

  • Doxycycline or minocycline 100 mg twice daily for 14 days may cure 40-70% of persistent infections 3
  • Pristinamycin 1g four times daily for 10 days has approximately 75% cure rate 3

Important caveat: Doxycycline 100 mg twice daily for 7 days has only 30-40% cure rate and should never be used as monotherapy for confirmed M. genitalium 1, 4, 3. However, it may be considered as empiric therapy when testing is unavailable and chlamydia/gonorrhea are also suspected 1.

Patient Instructions and Partner Management

  • Patients must abstain from sexual intercourse for 7 days after completing single-dose therapy or until completion of multi-day regimens 1, 4
  • All sexual partners require evaluation and treatment, even if asymptomatic, to prevent reinfection 1, 4
  • Dispense medications on-site when possible and directly observe the first dose to maximize compliance 1

Follow-Up Requirements

  • Patients should return for evaluation if symptoms persist or recur, as this indicates treatment failure requiring resistance testing and alternative therapy 1, 2
  • Repeat testing at 3-6 months is recommended due to high reinfection rates 1
  • Testing at less than 3 weeks after therapy completion may yield false-positive results with NAAT due to detection of non-viable organisms 1
  • Persistent symptoms after treatment strongly correlate with persistent infection (91% vs 17% in those cured), making symptom assessment a critical indicator for treatment failure 6

Resistance Considerations

The landscape of M. genitalium treatment has shifted dramatically due to antimicrobial resistance. Macrolide resistance has increased from 0% in 2006-2007 to 18% by 2011 in some populations 5, and moxifloxacin resistance is also emerging 3, 8. This underscores the importance of resistance-guided therapy when testing is available and the need for test-of-cure in all treated patients 3.

References

Guideline

Treatment for Mycoplasma genitalium

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Treatment for Mycoplasma Genitalium

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

2021 European guideline on the management of Mycoplasma genitalium infections.

Journal of the European Academy of Dermatology and Venereology : JEADV, 2022

Guideline

Treatment of Mycoplasma genitalium and Ureaplasma Infections

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

2016 European guideline on Mycoplasma genitalium infections.

Journal of the European Academy of Dermatology and Venereology : JEADV, 2016

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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