What is the typical course and prognosis of influenza (flu)?

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Last updated: December 22, 2025View editorial policy

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Course and Prognosis of Influenza

For most healthy individuals, uncomplicated influenza resolves within 3-7 days, though cough and malaise commonly persist for more than 2 weeks; however, high-risk populations including adults >65 years, infants <1 year, pregnant women, and those with chronic conditions face substantially elevated risks of complications, hospitalization, and death. 1

Typical Disease Course

Incubation and Infectious Period

  • The incubation period ranges from 1-4 days, with an average of 2 days 1
  • Adults are infectious from the day before symptom onset through approximately 5-6 days after illness begins 1
  • Children can be infectious before symptoms appear and remain contagious for up to 10 days after onset 1
  • Severely immunocompromised individuals may shed virus for weeks to months 1

Clinical Presentation

  • Influenza characteristically presents with abrupt onset of fever, myalgia, headache, severe malaise, nonproductive cough, sore throat, and rhinitis 1, 2
  • Young children often present atypically with otitis media, nausea, vomiting, and may not report classic influenza symptoms 1
  • Infants may initially present with signs mimicking bacterial sepsis, high fever, or febrile seizures (occurring in up to 20% of hospitalized children) 1

Resolution Timeline

  • Uncomplicated illness typically resolves after 3-7 days in most individuals 1
  • Cough and malaise frequently persist for more than 2 weeks even after other symptoms resolve 1

Prognosis by Risk Category

High-Risk Populations

The following groups face significantly elevated risks of severe outcomes:

  • Adults aged >65 years (account for >90% of influenza-related deaths) 1
  • Infants aged 0-1 years (hospitalization rates comparable to elderly patients at 200-1,000 per 100,000) 1
  • Pregnant women 1
  • Individuals with chronic cardiopulmonary conditions 1
  • Immunocompromised persons (experience prolonged viral shedding and more severe symptoms) 1

Hospitalization Rates

  • Children 0-4 years with high-risk conditions: approximately 500 per 100,000 population 1
  • Children 0-4 years without high-risk conditions: approximately 100 per 100,000 population 1
  • Adults >65 years: 200 to >1,000 per 100,000 population 1
  • Annual U.S. influenza-associated hospitalizations average approximately 114,000, with 57% occurring in persons <65 years 1

Mortality

  • During influenza epidemics, estimated death rates range from 30 to >150 deaths per 100,000 persons aged >65 years 1
  • Pediatric deaths range from 44-68 annually in recent seasons, with 94% of deaths occurring in unvaccinated children 1
  • More than 20,000 influenza-associated deaths occur during severe epidemic years in the United States 1

Complications and Their Prognosis

Pulmonary Complications

  • Secondary bacterial pneumonia (particularly Staphylococcus aureus, including MRSA strains) carries high mortality 3
  • Primary influenza viral pneumonia can occur, each with distinct clinical presentations 1, 3
  • Children may develop croup, bronchiolitis, or pneumonia 1

Extrapulmonary Complications

Though uncommon, influenza is associated with serious complications including: 1

  • Encephalopathy and transverse myelitis
  • Myositis, myocarditis, and pericarditis
  • Reye syndrome (particularly in children)
  • Exacerbation of underlying cardiac or pulmonary disease

Pediatric-Specific Outcomes

  • Mortality rate for hospitalized children with laboratory-confirmed influenza: 0.6% 1
  • Overall mortality for all laboratory-confirmed influenza in children: 0.1% 1
  • Most pediatric deaths occur in children without known high-risk conditions, though deaths are more frequent among those with risk factors 1

Critical Clinical Pitfalls

Important diagnostic limitation: Respiratory illnesses caused by influenza are difficult to distinguish from other respiratory pathogens based on symptoms alone, with clinical definitions showing sensitivity of only 63-78% and specificity of 55-71% compared to viral culture 1, 4

Do not rely on "sudden onset" as a diagnostic criterion - positive predictive value ranges from only 30% in elderly patients to 79-88% in healthy adults 4

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Influenza: Diagnosis and Treatment.

American family physician, 2019

Research

Complications of viral influenza.

The American journal of medicine, 2008

Guideline

Distinguishing Colds from Influenza Based on Symptom Onset

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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