What are the steps for testing and treating celiac disease?

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Testing for Celiac Disease

Begin with IgA tissue transglutaminase antibody (tTG-IgA) testing while the patient is actively consuming gluten, followed by upper endoscopy with multiple duodenal biopsies for confirmation in adults. 1, 2

Initial Serologic Testing

The IgA tTG is the single most efficient screening test for celiac disease, with sensitivity of 90-96% and specificity >95%. 3, 1

  • Measure total IgA level simultaneously with tTG-IgA to identify IgA deficiency, which occurs in 1-3% of celiac patients and causes false-negative results 1, 2, 4
  • Testing must be performed while the patient consumes at least 10g of gluten daily for 6-8 weeks—starting a gluten-free diet before testing leads to false-negative results 1, 2, 4
  • Do NOT use IgA or IgG antigliadin antibody tests, as their diagnostic performance is inferior and adds no value 3, 5

Confirmatory Serologic Testing

  • When tTG-IgA is elevated (especially >10× upper limit of normal), perform IgA endomysial antibody (EMA-IgA) as confirmatory testing with excellent specificity of 99.6% 3, 1, 2
  • The combination of tTG-IgA >10× upper limit of normal plus positive EMA-IgA approaches 100% positive predictive value for celiac disease 2, 4

Testing in IgA Deficiency

  • If IgA deficiency is confirmed, use IgG-based tests: IgG deamidated gliadin peptide (DGP-IgG) or IgG tissue transglutaminase (tTG-IgG) 3, 1, 2
  • Critical pitfall: IgG-based tests are markedly less accurate in patients with normal IgA levels and should NOT be used in that setting 2

Intestinal Biopsy Confirmation

Upper endoscopy with small bowel biopsy remains the gold standard for establishing the diagnosis of celiac disease in adults. 3, 2, 4

  • Obtain at least 6 biopsy specimens total: 1-2 from the duodenal bulb and at least 4 from the second part of the duodenum or beyond 3, 2, 4
  • Multiple biopsies are essential because mucosal changes can be patchy, and Brunner's glands or peptic changes in the bulb may hamper diagnosis 3
  • Characteristic histologic findings include villous atrophy (partial to total), crypt lengthening with increased lamina propria, and increased intraepithelial lymphocytes 3, 1
  • Biopsy remains mandatory in adults despite high antibody levels to establish definitive diagnosis and rule out other causes of villous atrophy 2, 4

Important Histologic Pitfall

  • Increased intraepithelial lymphocytes without architectural changes (villous atrophy) should NOT be considered diagnostic of celiac disease—this may represent latent disease or other conditions 3

HLA Genetic Testing

HLA-DQ2 and HLA-DQ8 testing has >99% negative predictive value—absence of both alleles essentially rules out celiac disease. 1, 2, 4

When to Use HLA Testing

  • When celiac disease is strongly suspected despite negative serology 3, 1, 2
  • In patients with equivocal small-bowel histologic findings 1, 2
  • In patients already on a gluten-free diet without prior testing 1, 2
  • In patients with discrepant celiac-specific serology and histology 1

When NOT to Use HLA Testing

  • HLA testing adds no diagnostic value when tTG-IgA is highly elevated, as it does not confirm diagnosis 4

Diagnostic Algorithm for Negative Serology with High Clinical Suspicion

  1. Confirm the patient is consuming adequate gluten (at least 10g daily for 6-8 weeks) 2, 4
  2. Verify total IgA level is normal 2, 4
  3. Perform HLA-DQ2/DQ8 testing—if positive, proceed to biopsy 2, 4
  4. If HLA is negative, celiac disease is essentially ruled out 1, 2, 4

Special Population Considerations

Children Under 2 Years

  • Combine tTG-IgA with IgG and IgA deamidated gliadin peptides for improved sensitivity 1, 2, 4

Pediatric Biopsy-Avoidance Strategy

  • In children with tTG-IgA ≥10× upper limit of normal, positive EMA-IgA, and positive HLA-DQ2/DQ8, biopsy may be avoided according to pediatric guidelines 1, 2
  • This strategy does NOT apply to adults—biopsy remains mandatory 2, 4

Testing Patients Already on a Gluten-Free Diet

This is a common and problematic scenario that requires gluten rechallenge. 1, 2

  • Resume normal diet with three slices of wheat bread daily for 1-3 months before repeat testing 1, 2
  • Some patients may require several years of gluten challenge for histologic relapse to occur 2
  • If gluten rechallenge is not feasible, HLA-DQ2/DQ8 testing can help: negative results rule out celiac disease 1, 2

High-Risk Groups Requiring Testing

Test these populations even without typical symptoms: 3, 2, 4

  • First-degree relatives of celiac patients 3, 2, 4
  • Type 1 diabetes mellitus 3, 2, 4
  • Unexplained iron deficiency anemia 3, 2, 4
  • Premature osteoporosis 3, 2, 4
  • Autoimmune thyroid disease 3, 2, 4
  • Down syndrome 3, 2, 4
  • Turner syndrome 3, 2
  • Unexplained liver transaminase elevations 3, 2, 4
  • Primary biliary cirrhosis and autoimmune hepatitis 3
  • Unexplained recurrent fetal loss 3
  • Sjögren's syndrome 3

Follow-Up Testing After Diagnosis

  • Perform follow-up serology at 6 and 12 months after diagnosis, then yearly thereafter 1, 2
  • Critical limitation: Negative serology after treatment does NOT guarantee intestinal mucosal healing 1, 2, 6, 7
  • Serologic tests (tTG-IgA and EMA-IgA) have only 50% and 45% sensitivity respectively for detecting persistent villous atrophy in patients on a gluten-free diet 6
  • Persistently elevated antibodies usually indicate ongoing gluten exposure and continued intestinal damage 1, 2
  • Patients with persistent or relapsing symptoms should undergo repeat endoscopic biopsies to determine healing, even with negative tTG-IgA 2

Critical Pitfalls to Avoid

  • Never initiate a gluten-free diet before completing diagnostic testing—this leads to false-negative results and diagnostic uncertainty 1, 2, 4
  • Never rely solely on serology without biopsy confirmation in adults—this leads to misdiagnosis 1, 2, 4
  • Never use symptom improvement on a gluten-free diet as diagnostic evidence—this has low positive predictive value and is not specific for celiac disease 1
  • Never assume negative follow-up serology means mucosal healing—44% of patients with persistent villous atrophy have normal tTG levels 6, 7

References

Guideline

Celiac Disease Diagnostic Guidelines

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Celiac Disease Diagnosis and Management

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Celiac Disease Diagnosis Guidelines

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

What is the role of serologic testing in celiac disease? A prospective, biopsy-confirmed study with economic analysis.

Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association, 2008

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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