What is the next step in managing a 13-year-old boy with penile pain during urination, previously treated with fosfomycin (generic name), who has a negative urinalysis (UA) and refuses a genital examination?

Medical Advisory BoardAll articles are reviewed for accuracy by our Medical Advisory Board
Educational purpose only • Exercise caution as content is pending human review
Article Review Status
Submitted
Under Review
Approved

Last updated: January 1, 2026View editorial policy

Personalize

Help us tailor your experience

Which best describes you? Your choice helps us use language that's most understandable for you.

Management of Adolescent Male with Dysuria, Negative UA, and Refusal of Genital Examination

The most critical next step is to obtain nucleic acid amplification testing (NAAT) on a first-void urine sample for Chlamydia trachomatis and Neisseria gonorrhoeae before initiating any further treatment, as sexually transmitted urethritis is the most likely diagnosis in this clinical scenario. 1

Diagnostic Approach

Why STI Testing is Essential

  • Urethritis from sexually transmitted infections is the primary concern in an adolescent male with dysuria and a negative urinalysis, particularly when genital examination is refused 1
  • The European Association of Urology strongly recommends performing validated NAAT on first-void urine samples or urethral smears before empirical treatment to diagnose chlamydial and gonococcal infections 1
  • NAAT testing on first-void urine eliminates the need for genital examination or urethral swabs, making it ideal for this patient who refuses physical examination 1

Critical Clinical Context

  • Fosfomycin was inappropriate initial treatment for this presentation, as it is indicated only for uncomplicated cystitis in women, not for urethritis or UTIs in males 2, 3
  • A negative urinalysis does not rule out urethritis, as pyuria may be absent in STI-related urethritis, and the pathogens (C. trachomatis, N. gonorrhoeae) are not detected on standard urine culture 1
  • The patient's age (13 years) and symptom pattern (penile pain with urination) are consistent with urethritis rather than cystitis or pyelonephritis 1

Immediate Management Steps

Testing Protocol

  • Collect first-void urine (initial 10-20 mL of urination) for NAAT testing for Chlamydia trachomatis and Neisseria gonorrhoeae 1
  • If NAAT results will be delayed and symptoms are severe, the European Association of Urology recommends delaying treatment until NAAT results are available in patients with mild symptoms 1
  • However, if symptoms are moderate to severe or the patient is unlikely to follow up, empirical treatment may be warranted 1

Empirical Treatment Considerations (If Necessary)

If treatment cannot be delayed pending NAAT results:

  • For non-gonococcal urethritis (unidentified pathogen): Doxycycline 100 mg twice daily orally for 7 days 1
  • Alternative: Azithromycin 500 mg orally on day 1, then 250 mg orally for 4 days 1
  • For suspected gonococcal infection: Ceftriaxone 1 g intramuscularly or intravenously as a single dose PLUS azithromycin 1 g orally as a single dose 1

Important Clinical Pitfalls to Avoid

  • Do not repeat fosfomycin or use it for urethritis, as it has no role in treating STI-related urethritis and is not indicated for males with UTIs 2, 3
  • Do not assume the negative UA rules out infection—urethritis often presents with negative standard urinalysis 1
  • Do not delay STI testing due to examination refusal—first-void urine NAAT is highly sensitive and specific without requiring genital examination 1
  • Do not treat empirically without planning for NAAT testing, as antimicrobial resistance patterns (particularly for gonorrhea) require culture-based confirmation and susceptibility testing 1

Follow-Up and Partner Management

Post-Treatment Monitoring

  • Perform urethral swab culture before treatment initiation in patients with positive NAAT for gonorrhea to assess antimicrobial resistance profiles 1
  • If empirical treatment is given, ensure NAAT results are followed up to confirm pathogen identification and guide any necessary treatment modifications 1
  • Sexual partners should be treated while maintaining patient confidentiality 1

Counseling Considerations

  • Given the patient's age (13 years), confidential sexual history and risk assessment are essential 1
  • Discuss the importance of partner notification and treatment to prevent reinfection 1
  • Provide education about STI prevention and the need for follow-up testing 1

Alternative Diagnoses to Consider

If NAAT testing is negative for C. trachomatis and N. gonorrhoeae:

  • Consider Mycoplasma genitalium or Ureaplasma urealyticum as causes of non-gonococcal urethritis 1
  • Evaluate for Trichomonas vaginalis, though less common in males 1
  • Consider non-infectious causes such as chemical irritation, trauma, or anatomical abnormalities 1
  • If symptoms persist despite negative testing, referral to urology or adolescent medicine may be warranted for further evaluation 1

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Fosfomycin Treatment for Uncomplicated Urinary Tract Infections

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Fosfomicina para Infecciones Urinarias

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

Have a follow-up question?

Our Medical A.I. is used by practicing medical doctors at top research institutions around the world. Ask any follow up question and get world-class guideline-backed answers instantly.