What is the pathophysiology of Chronic Myelogenous Leukemia (CML) and its management?

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Chronic Myelogenous Leukemia: Pathophysiology Pearls

Molecular Basis and Chromosomal Abnormality

CML arises from a balanced translocation t(9;22)(q34;q11.2) between chromosomes 9 and 22, creating the Philadelphia chromosome (Ph), which was the first recurrent chromosomal abnormality identified in human malignancy in 1960. 1, 2

  • The translocation fuses the ABL1 gene from chromosome 9q34 with the BCR gene on chromosome 22q11.2, generating the BCR-ABL1 fusion oncogene 1, 3, 4
  • In most patients (>95%), chromosomal breakpoints occur in intron 13 or 14 of the BCR gene (major breakpoint cluster region; M-BCR), while ABL1 breaks occur between exons Ib and Ia, or between exons 1 and 2 1
  • Splicing almost invariably fuses ABL1 exon 2 with BCR exons 13 or 14, producing e13a2 and e14a2 transcripts 1

The BCR-ABL1 Oncoprotein

The BCR-ABL1 fusion gene encodes a chimeric protein (p210BCR-ABL) with constitutively active, deregulated tyrosine kinase activity that drives CML pathogenesis. 1, 5

  • The p210 protein contains NH2-terminal domains of BCR and COOH-terminal domains of ABL 1
  • Three critical functional changes occur: (1) ABL becomes constitutively active as a tyrosine kinase enzyme, (2) DNA-protein binding activity is attenuated, and (3) binding to cytoskeletal actin microfilaments is enhanced 1
  • These molecular changes increase proliferation, impair differentiation, and block apoptosis in hematopoietic stem cells 1, 6

Variant BCR-ABL1 Transcripts

  • Unusual transcripts include e1a2 encoding p190 (typically seen in Ph-positive acute lymphoblastic leukemia, involving minor BCR; m-BCR) and e19a2 encoding p230 (associated with enhanced neutrophil differentiation, involving micro BCR; μ-BCR) 1
  • Atypical transcripts (e13a3, e14a3, e6a2) occur in approximately 1-2% of CML patients 1

Disease Phases and Natural History

CML occurs in three distinct phases—chronic phase (CP), accelerated phase (AP), and blast phase (BP)—with most patients (90-95%) diagnosed in chronic phase in developed countries. 1, 2, 7

Chronic Phase Characteristics

  • Defined by <15% blasts in blood and bone marrow 7
  • Peripheral blood shows excessive granulocytosis with left shift, including immature forms (myelocytes, metamyelocytes), plus basophilia and eosinophilia 2, 7
  • White blood cell count often exceeds 100 × 10⁹/L at presentation 7

Disease Progression Timeline

  • Untreated CP-CML progresses to AP-CML or BP-CML in 3-5 years on average 1, 6, 8
  • With modern tyrosine kinase inhibitor (TKI) therapy, annual progression rate has decreased dramatically to 1-1.5% from the historical >20% 5
  • Gene expression profiling demonstrates that the bulk of genetic changes occur during the transition from CP to AP, with AP and BP showing similar expression patterns 1, 5

Accelerated Phase

  • Defined by 15-29% blasts in peripheral blood or bone marrow 7
  • Progression bridges a continuum of clinical features including fever, bone pain, increasing spleen size, and cytogenetic changes 1

Blast Phase

  • Defined by ≥30% blasts (European LeukemiaNet criteria) or ≥20% blasts (WHO criteria) in blood or bone marrow, or extramedullary blast involvement 5, 7
  • 70-80% of blast phase cases are myeloid phenotype, resembling acute myeloid leukemia 5
  • Blast phase CML remains BCR-ABL1 positive (Philadelphia chromosome positive), distinguishing it from de novo AML which is BCR-ABL1 negative 5
  • Survival at blast phase is less than 1 year without effective treatment 6

Mechanisms of Disease Progression

BCR-ABL1 positive cells are genetically unstable and prone to develop additional genomic abnormalities (clonal evolution), leading to disease progression. 2

  • Additional chromosomal abnormalities in Ph-positive cells (ACA/Ph+) represent clonal cytogenetic evolution 1
  • Activation of the beta-catenin signaling pathway in CML granulocyte-macrophage progenitors enhances self-renewal activity and leukemic potential, representing a key pathobiologic event in evolution to blast phase 1
  • During progression, mutations accumulate and the Philadelphia chromosome persists through clonal evolution 6

Diagnostic Confirmation

Diagnosis requires demonstration of the Philadelphia chromosome or BCR-ABL1 fusion gene in a patient with characteristic peripheral blood findings showing excessive granulocytosis with left shift. 2, 7

  • Bone marrow cytogenetics detects the t(9;22)(q34;q11) translocation and identifies additional chromosomal abnormalities 1, 7
  • Fluorescence in situ hybridization (FISH) with dual probes for BCR and ABL1 genes is acceptable when bone marrow evaluation is not feasible, though interphase FISH has a false-positive rate of 1-5% 1
  • Quantitative RT-PCR establishes baseline BCR-ABL1 transcript levels and is the most sensitive assay for measuring BCR-ABL1 mRNA, detecting one CML cell in a background of 100,000 normal cells 1, 7

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Chronic Myeloid Leukemia (CML) Diagnosis and Treatment

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Guideline

CML and AML: Key Differences in Disease Characteristics and Treatment Approaches

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Targeted chronic myeloid leukemia therapy: seeking a cure.

Journal of managed care pharmacy : JMCP, 2007

Guideline

Diagnosis and Management of Chronic Myeloid Leukemia (CML)

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Chronic myelogenous leukemia: a review.

The American journal of medicine, 1996

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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