What are the potential causes of a prolonged sore throat in a patient of unknown age and sex with no specified past medical history?

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Prolonged Sore Throat: Causes and Diagnostic Approach

When a sore throat persists beyond 14 days, you must expand your differential diagnosis beyond typical acute viral and bacterial pharyngitis to include chronic infections, non-infectious inflammatory conditions, and malignancy.

Key Distinction: Acute vs. Prolonged Duration

The guidelines specifically define acute sore throat as symptoms lasting less than 14 days 1. Prolonged sore throat (≥14 days) falls outside standard acute pharyngitis guidelines and requires a different diagnostic approach 1.

Causes of Prolonged Sore Throat

Infectious Causes

Bacterial Pathogens:

  • Fusobacterium necrophorum - Recent evidence suggests this organism plays a role in recurrent or persistent pharyngitis in adolescents and young adults, with or without bacteremia or Lemierre's syndrome, which requires urgent antibiotic therapy 1
  • Groups C and G β-hemolytic streptococci - Can cause persistent pharyngitis, particularly in college students and adults 1
  • Mycoplasma pneumoniae and Chlamydophila pneumoniae - Uncommon but recognized causes of persistent pharyngitis, often associated with atypical pneumonia 1, 2
  • Arcanobacterium haemolyticum - Rare cause that may present with scarlet fever-like rash, particularly in teenagers and young adults 1
  • Neisseria gonorrhoeae - Consider in sexually active individuals with persistent pharyngitis 1

Viral Pathogens:

  • Epstein-Barr virus (EBV) - Infectious mononucleosis can cause prolonged pharyngitis with generalized lymphadenopathy and splenomegaly 1
  • Cytomegalovirus (CMV) - Can cause persistent pharyngitis as part of systemic infection 1
  • HIV infection - Should be considered, especially if associated with candidal pharyngitis 1, 2
  • Herpes simplex virus - Can cause recurrent or persistent pharyngeal symptoms 1

Fungal Infection:

  • Candida species - Particularly in immunocompromised patients; presence should prompt HIV testing 2

Non-Infectious Causes

Neoplastic:

  • Tonsillar cancer - Must be investigated in prolonged cases, especially with unilateral symptoms 3
  • Other pharyngeal malignancies - Consider with persistent unilateral symptoms or mass 3

Inflammatory:

  • Thyroiditis - Uncommon but recognized cause of persistent throat pain 2
  • Granulomatosis with polyangiitis - Can cause chronic pharyngeal symptoms 1

Mechanical/Structural:

  • Peritonsillar or retropharyngeal abscess - Requires surgical drainage 1, 2
  • Vincent's angina - Mixed anaerobic infection requiring specific treatment 1

Critical Red Flags Requiring Immediate Investigation

You must exclude these serious conditions in any prolonged sore throat:

  • Immunosuppression or HIV infection 1, 2
  • Severe systemic infection or sepsis 1
  • History of acute rheumatic fever 1
  • Unilateral symptoms suggesting abscess or malignancy 2, 3
  • Difficulty breathing or stridor suggesting supraglottitis 3
  • Persistent fever despite treatment 3

Diagnostic Approach for Prolonged Sore Throat

Step 1: Detailed History

  • Duration of symptoms (>14 days defines prolonged) 1
  • Sexual history (gonorrhea, HIV risk) 1
  • Immunosuppression status 1
  • Travel history outside usual geographic area 1
  • Associated symptoms: generalized lymphadenopathy/splenomegaly (EBV), atypical pneumonia (Mycoplasma/Chlamydophila), rash (Arcanobacterium), oral thrush (HIV/Candida) 1, 2

Step 2: Physical Examination

  • Look for unilateral tonsillar enlargement or mass (malignancy, abscess) 2, 3
  • Assess for generalized lymphadenopathy and splenomegaly (EBV, HIV) 1
  • Examine for oral candidiasis (immunosuppression) 2
  • Check for membrane formation (diphtheria, though rare) 1
  • Evaluate for cherry-red epiglottis (Haemophilus influenzae type b) 2

Step 3: Laboratory Investigation

  • Throat culture - Remains gold standard for bacterial identification 1
  • Monospot or EBV serology - If generalized lymphadenopathy present 1
  • HIV testing - Especially if candidiasis or other risk factors present 2
  • Gonorrhea culture - If sexually active with persistent symptoms 1
  • Consider Fusobacterium necrophorum culture - In adolescents/young adults with persistent symptoms 1

Step 4: Specialist Referral

  • Otolaryngology consultation - For any persistent unilateral symptoms, suspected malignancy, or failure to respond to appropriate treatment 3
  • Infectious disease consultation - For suspected Lemierre's syndrome, HIV, or complex infections 1

Common Pitfalls to Avoid

  • Do not assume prolonged symptoms are simply treatment-resistant streptococcal pharyngitis - The differential is much broader 1
  • Do not prescribe repeated courses of antibiotics without establishing a bacterial diagnosis - This contributes to resistance and delays proper diagnosis 1
  • Do not miss Fusobacterium necrophorum - This emerging pathogen causes persistent pharyngitis in adolescents/young adults and can lead to life-threatening Lemierre's syndrome 1
  • Do not overlook malignancy - Unilateral persistent symptoms warrant otolaryngology evaluation 3
  • Do not forget to consider HIV - Especially with candidal pharyngitis or other opportunistic findings 2

When Standard Acute Pharyngitis Guidelines Do Not Apply

The ESCMID and IDSA guidelines explicitly exclude prolonged/recurrent cases from their acute pharyngitis recommendations 1. These patients require individualized investigation based on clinical presentation, risk factors, and response to initial therapy 1.

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

The patient with sore throat.

The Medical clinics of North America, 2010

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Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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