Prolonged Sore Throat: Causes and Diagnostic Approach
When a sore throat persists beyond 14 days, you must expand your differential diagnosis beyond typical acute viral and bacterial pharyngitis to include chronic infections, non-infectious inflammatory conditions, and malignancy.
Key Distinction: Acute vs. Prolonged Duration
The guidelines specifically define acute sore throat as symptoms lasting less than 14 days 1. Prolonged sore throat (≥14 days) falls outside standard acute pharyngitis guidelines and requires a different diagnostic approach 1.
Causes of Prolonged Sore Throat
Infectious Causes
Bacterial Pathogens:
- Fusobacterium necrophorum - Recent evidence suggests this organism plays a role in recurrent or persistent pharyngitis in adolescents and young adults, with or without bacteremia or Lemierre's syndrome, which requires urgent antibiotic therapy 1
- Groups C and G β-hemolytic streptococci - Can cause persistent pharyngitis, particularly in college students and adults 1
- Mycoplasma pneumoniae and Chlamydophila pneumoniae - Uncommon but recognized causes of persistent pharyngitis, often associated with atypical pneumonia 1, 2
- Arcanobacterium haemolyticum - Rare cause that may present with scarlet fever-like rash, particularly in teenagers and young adults 1
- Neisseria gonorrhoeae - Consider in sexually active individuals with persistent pharyngitis 1
Viral Pathogens:
- Epstein-Barr virus (EBV) - Infectious mononucleosis can cause prolonged pharyngitis with generalized lymphadenopathy and splenomegaly 1
- Cytomegalovirus (CMV) - Can cause persistent pharyngitis as part of systemic infection 1
- HIV infection - Should be considered, especially if associated with candidal pharyngitis 1, 2
- Herpes simplex virus - Can cause recurrent or persistent pharyngeal symptoms 1
Fungal Infection:
- Candida species - Particularly in immunocompromised patients; presence should prompt HIV testing 2
Non-Infectious Causes
Neoplastic:
- Tonsillar cancer - Must be investigated in prolonged cases, especially with unilateral symptoms 3
- Other pharyngeal malignancies - Consider with persistent unilateral symptoms or mass 3
Inflammatory:
- Thyroiditis - Uncommon but recognized cause of persistent throat pain 2
- Granulomatosis with polyangiitis - Can cause chronic pharyngeal symptoms 1
Mechanical/Structural:
- Peritonsillar or retropharyngeal abscess - Requires surgical drainage 1, 2
- Vincent's angina - Mixed anaerobic infection requiring specific treatment 1
Critical Red Flags Requiring Immediate Investigation
You must exclude these serious conditions in any prolonged sore throat:
- Immunosuppression or HIV infection 1, 2
- Severe systemic infection or sepsis 1
- History of acute rheumatic fever 1
- Unilateral symptoms suggesting abscess or malignancy 2, 3
- Difficulty breathing or stridor suggesting supraglottitis 3
- Persistent fever despite treatment 3
Diagnostic Approach for Prolonged Sore Throat
Step 1: Detailed History
- Duration of symptoms (>14 days defines prolonged) 1
- Sexual history (gonorrhea, HIV risk) 1
- Immunosuppression status 1
- Travel history outside usual geographic area 1
- Associated symptoms: generalized lymphadenopathy/splenomegaly (EBV), atypical pneumonia (Mycoplasma/Chlamydophila), rash (Arcanobacterium), oral thrush (HIV/Candida) 1, 2
Step 2: Physical Examination
- Look for unilateral tonsillar enlargement or mass (malignancy, abscess) 2, 3
- Assess for generalized lymphadenopathy and splenomegaly (EBV, HIV) 1
- Examine for oral candidiasis (immunosuppression) 2
- Check for membrane formation (diphtheria, though rare) 1
- Evaluate for cherry-red epiglottis (Haemophilus influenzae type b) 2
Step 3: Laboratory Investigation
- Throat culture - Remains gold standard for bacterial identification 1
- Monospot or EBV serology - If generalized lymphadenopathy present 1
- HIV testing - Especially if candidiasis or other risk factors present 2
- Gonorrhea culture - If sexually active with persistent symptoms 1
- Consider Fusobacterium necrophorum culture - In adolescents/young adults with persistent symptoms 1
Step 4: Specialist Referral
- Otolaryngology consultation - For any persistent unilateral symptoms, suspected malignancy, or failure to respond to appropriate treatment 3
- Infectious disease consultation - For suspected Lemierre's syndrome, HIV, or complex infections 1
Common Pitfalls to Avoid
- Do not assume prolonged symptoms are simply treatment-resistant streptococcal pharyngitis - The differential is much broader 1
- Do not prescribe repeated courses of antibiotics without establishing a bacterial diagnosis - This contributes to resistance and delays proper diagnosis 1
- Do not miss Fusobacterium necrophorum - This emerging pathogen causes persistent pharyngitis in adolescents/young adults and can lead to life-threatening Lemierre's syndrome 1
- Do not overlook malignancy - Unilateral persistent symptoms warrant otolaryngology evaluation 3
- Do not forget to consider HIV - Especially with candidal pharyngitis or other opportunistic findings 2
When Standard Acute Pharyngitis Guidelines Do Not Apply
The ESCMID and IDSA guidelines explicitly exclude prolonged/recurrent cases from their acute pharyngitis recommendations 1. These patients require individualized investigation based on clinical presentation, risk factors, and response to initial therapy 1.