What do I assess in a patient with a canker sore?

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Assessment of Canker Sores (Recurrent Aphthous Stomatitis)

For any oral ulcer persisting beyond 2 weeks or not responding to 1-2 weeks of empiric treatment, biopsy is mandatory to exclude malignancy and serious systemic disease. 1

Initial Clinical Assessment

History Taking

Duration and Pattern

  • Document the exact date when the ulcer first appeared and track its progression 1
  • Determine if this is a first occurrence or recurrent pattern (RAS typically begins in second decade, peaks in third decade) 2, 3
  • Ask about frequency of recurrence and duration of individual lesions 4

Pain and Functional Impact

  • Assess pain severity and impact on eating, drinking, and speaking 1
  • Note if pain is disproportionate to the size of the lesion 1

Associated Symptoms

  • Ask about fever, malaise, or prodromal illness 1
  • Inquire about genital ulcers (suggests Behçet's disease) 3, 4
  • Ask about eye symptoms including pain, redness, or vision changes (posterior uveitis in Behçet's) 3
  • Document gastrointestinal symptoms: abdominal pain, diarrhea, or blood in stool (Crohn's disease) 1
  • Ask about skin lesions on hands, feet, or elsewhere 5, 6
  • Inquire about joint pain or swelling 6

Medication and Exposure History

  • Record ALL medications taken in the previous 2 months, including over-the-counter and complementary therapies, with exact start dates 1
  • Document any recent medication changes or brand switches 1
  • Ask about previous drug allergies and reaction types 1

Risk Factors and Triggers

  • Family history of recurrent oral ulcers (genetic predisposition) 1, 3
  • Recent trauma to the area (biting, dental work, sharp teeth) 1, 2
  • Dietary triggers: gluten, tomatoes, citrus fruits, spicy foods 5, 2, 4
  • Stress, hormonal changes, or recent illness 4
  • Smoking history (protective in RAS but risk factor for malignancy) 4

Medical History

  • History of tuberculosis or exposure 1
  • HIV status or risk factors 1
  • Diabetes or hyperglycemia 1
  • Inflammatory bowel disease 1
  • Immunosuppression or immunocompromising conditions 5
  • Blood disorders including anemia or neutropenia 1, 4

Physical Examination

Ulcer Characteristics

  • Location: Note if on non-keratinized mucosa (typical for RAS: buccal mucosa, labial mucosa, tongue, soft palate, floor of mouth) versus keratinized surfaces 3
  • Number: Single versus multiple ulcers 1
  • Size and morphology:
    • Minor aphthae: <1 cm, round/oval, shallow 3
    • Major aphthae: >1 cm, deeper, may scar 3
    • Herpetiform: multiple small ulcers 3
  • Borders: Well-circumscribed with erythematous halo (typical RAS) versus irregular, raised, or indurated edges (concerning for malignancy) 1, 3
  • Base: Yellow or gray pseudomembrane (typical RAS) versus necrotic, granular, or stellate appearance 1
  • Surrounding tissue: Look for inflammation, induration, or fixation to underlying structures 1

Extraoral and Systemic Examination

  • Examine skin for vesicles, bullae, or rash on hands and feet (hand-foot-mouth disease) 5, 6
  • Check for genital ulcers 1, 3
  • Assess eyes for conjunctivitis, uveitis, or other inflammation 1, 3
  • Palpate cervical lymph nodes for enlargement or tenderness 1
  • Examine for pathergy (skin hyperreactivity to minor trauma in Behçet's) 6

Intraoral Examination

  • Inspect all mucosal surfaces systematically 1
  • Look for other lesions with different morphology (may require multiple biopsies) 1
  • Check teeth for sharp edges, decay, or trauma sources 1
  • Assess oral hygiene status 1

Laboratory Investigations

Mandatory Pre-Biopsy Blood Work (before any biopsy for ulcers >2 weeks) 1, 7

  • Full blood count (screen for anemia, leukemia, neutropenia) 1, 7
  • Coagulation studies (PT/INR, aPTT) to exclude biopsy contraindications 7
  • Fasting blood glucose (hyperglycemia predisposes to fungal infections) 1, 7
  • HIV antibody 1, 7
  • Syphilis serology (RPR/VDRL and treponemal test) 1, 7

Additional Testing Based on Clinical Suspicion

  • Vitamin B12, folate, and iron studies if anemia or nutritional deficiency suspected 7, 4
  • Serum specific antibodies (Dsg1, Dsg3, BP180, BP230) if bullous disease suspected 1, 7
  • 1-3-β-D-glucan and galactomannan if invasive fungal infection suspected (diabetic or immunocompromised patients) 1, 7
  • Tuberculin skin test (PPD) or interferon gamma release assay (TB-IGRA) if TB suspected 7

When to Perform Biopsy

Absolute Indications 1, 7

  • Any ulcer persisting >2 weeks without clear diagnosis
  • Ulcer not responding to 1-2 weeks of appropriate treatment
  • Atypical features: irregular borders, induration, fixation to underlying tissue
  • Single large ulcer (>1 cm) in patient >40 years old
  • Ulcers with different morphological characteristics (require multiple biopsies) 1

Biopsy Technique Considerations

  • Include ulcer margin and adjacent normal tissue 1
  • For suspected bullous disease, obtain separate specimen for direct immunofluorescence (DIF) from perilesional tissue 7
  • Avoid biopsy of necrotic center alone 1

Imaging Studies

Indicated When:

  • Maxillofacial CT if ulcer near bone to assess for destruction 7
  • Chest CT if tuberculosis, fungal infection, or paraneoplastic syndrome suspected 7
  • Nasal CT and nasopharyngoscopy if nasal symptoms present 7

Red Flags Requiring Urgent Evaluation

  • Ulcer >2 weeks duration 1, 6
  • Indurated or fixed ulcer 1
  • Painless ulcer (malignancy often painless initially) 1
  • Unilateral cervical lymphadenopathy 1
  • Constitutional symptoms: fever, weight loss, night sweats 1
  • Respiratory symptoms: cough, dyspnea, hemoptysis 1
  • Widespread erosions with positive Nikolsky sign (pemphigus) 6
  • Severe oral involvement preventing adequate hydration 5

Common Pitfalls to Avoid

  • Do not assume all recurrent oral ulcers are benign RAS without proper assessment 1
  • Do not delay biopsy beyond 2 weeks for persistent ulcers 1
  • Do not biopsy without checking coagulation studies first 7
  • Do not miss associated systemic symptoms that suggest Behçet's, Crohn's, or other systemic disease 3, 4
  • Do not forget to ask about ALL medications including over-the-counter products 1
  • Do not overlook nutritional deficiencies as correctable causes 4

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Oral mucosal disease: recurrent aphthous stomatitis.

The British journal of oral & maxillofacial surgery, 2008

Guideline

Diagnosis and Management of Hand, Foot, and Mouth Disease

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Guideline

Differential Diagnosis of Skin Lesions on Hand with Oral Ulcers

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Angioedema with Oral Ulcers: Diagnosis and Management

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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