Differential Diagnosis for Sore Throat
Primary Etiologic Categories
The vast majority of acute pharyngitis cases are viral in origin, with Group A Streptococcus (GAS) being the most important bacterial pathogen requiring antibiotic treatment. 1
Viral Causes (Most Common)
- Respiratory viruses including rhinovirus, coronavirus, adenovirus, influenza virus, parainfluenza virus, and respiratory syncytial virus are the most frequent causes 1, 2
- Coxsackievirus and echoviruses can cause pharyngitis, often with characteristic oral vesicles (herpangina) 1, 3
- Herpes simplex virus presents with vesicular lesions in the oropharynx 1, 3
- Epstein-Barr virus (EBV) causes infectious mononucleosis with pharyngitis accompanied by generalized lymphadenopathy and splenomegaly 1
- Cytomegalovirus can cause pharyngitis as part of systemic infection 1, 3
Bacterial Causes
Group A Streptococcus (Most Important)
- GAS is the predominant bacterial pathogen requiring antibiotic treatment to prevent complications including acute rheumatic fever and peritonsillar abscess 1
- Accounts for 15-30% of pharyngitis cases in children aged 5-15 years 2
- Peak incidence in winter and early spring in temperate climates 1, 2
Other Bacterial Pathogens
- Groups C and G β-hemolytic streptococci can cause pharyngitis similar to GAS 1
- Fusobacterium necrophorum implicated in 10-20% of endemic pharyngitis cases in adolescents and can lead to Lemierre syndrome, a rare life-threatening condition 1
- Mycoplasma pneumoniae and Chlamydia pneumoniae are uncommon causes, often associated with atypical pneumonia 1
- Neisseria gonorrhoeae in sexually active individuals with pharyngeal exposure 1
- Corynebacterium diphtheriae (rare, presents with characteristic membrane) 1, 4
- Arcanobacterium haemolyticum particularly in adolescents and young adults, often with scarlatiniform rash 1
Life-Threatening Conditions Requiring Urgent Evaluation
Patients with severe signs including difficulty swallowing, drooling, neck tenderness, or swelling must be evaluated immediately for:
- Peritonsillar abscess 1
- Parapharyngeal abscess 1
- Epiglottitis (cherry-red epiglottis suggests Haemophilus influenzae type b) 1, 4
- Lemierre syndrome (suspect in adolescents/young adults with severe pharyngitis and systemic toxicity) 1
Non-Infectious Causes
- Thyroiditis (uncommon but should be considered in appropriate clinical context) 4
- Tonsillar cancer (consider with persistent unilateral symptoms) 5
Clinical Differentiation Strategy
Features Strongly Suggesting Viral Etiology
Do NOT test or treat with antibiotics when these features are present: 1
- Cough 1, 2
- Rhinorrhea/nasal congestion 1, 2
- Conjunctivitis 1, 2
- Hoarseness 1, 2
- Diarrhea 1, 3
- Oropharyngeal ulcers or vesicles 1, 2
Features Suggesting Bacterial (GAS) Infection
Use Modified Centor Criteria to determine testing threshold: 1
- Fever by history 1, 2
- Tonsillar exudates 1, 2
- Tender anterior cervical adenopathy 1, 2
- Absence of cough 1, 2
Additional suspicious features include:
- Persistent fever, rigors, night sweats 1
- Scarlatiniform rash 1, 2
- Palatal petechiae 1, 2
- Swollen tonsils 1
Critical Limitation
Clinical features alone cannot reliably differentiate bacterial from viral pharyngitis—even experienced physicians achieve only 35-50% accuracy when all clinical features suggest streptococcal infection. 1, 2
Diagnostic Algorithm
Step 1: Initial Clinical Assessment
If obvious viral features present (cough, rhinorrhea, conjunctivitis, oral ulcers): No testing needed, provide symptomatic treatment only 1, 2
Step 2: Apply Modified Centor Criteria
Patients meeting <3 Centor criteria: Do not test—probability of GAS is too low 1
Patients meeting ≥3 Centor criteria: Proceed to microbiological testing 1
Step 3: Microbiological Confirmation
Rapid Antigen Detection Test (RADT):
- Specificity 90-96%, sensitivity 79-88% 2
- Positive RADT is diagnostic—no backup culture needed 1, 2
- In children and adolescents, negative RADT MUST be confirmed with throat culture due to low sensitivity and higher risk of rheumatic fever 1, 2
In adults:
- Backup throat culture for negative RADT is optional given low incidence of GAS and exceptionally low risk of rheumatic fever 1
- Physicians seeking maximal sensitivity may continue backup cultures 1
Step 4: Red Flag Assessment
Immediately evaluate for life-threatening conditions if:
- Difficulty swallowing or drooling 1
- Neck tenderness or swelling 1
- Severe pharyngitis in adolescent/young adult (consider Lemierre syndrome) 1
- Stridor or respiratory distress (epiglottitis) 6
Treatment Approach
For Confirmed GAS Pharyngitis
Penicillin V remains first-line treatment due to proven efficacy, narrow spectrum, safety, low cost, and absence of resistance 2, 7
- Penicillin V: 250 mg three times daily for 10 days 8, 7
- Alternative: Amoxicillin (especially in younger children who prefer once-daily dosing) 2
- For penicillin allergy: First-generation cephalosporins or macrolides 1
- 10-day duration is mandatory for bacterial eradication and rheumatic fever prevention 1, 2
Caution: Avoid amoxicillin in adolescents/young adults with possible EBV due to severe rash risk 2
For Viral Pharyngitis
Antibiotics provide NO benefit and should NOT be prescribed 1
Symptomatic management:
- Analgesics: aspirin, acetaminophen, NSAIDs, or throat lozenges 1, 2
- Salt water gargles 1, 2
- Adequate hydration 2
- Reassurance that typical course is <1 week 1
Common Pitfalls to Avoid
- Prescribing antibiotics based on clinical impression alone without microbiological confirmation leads to massive antibiotic overuse—over 60% of adults with sore throat receive unnecessary antibiotics 1
- Failing to recognize GAS carriers with concurrent viral pharyngitis—positive throat culture doesn't always mean GAS is the cause 2
- Not backing up negative RADT with culture in children/adolescents misses true GAS cases at higher risk for rheumatic fever 1, 2
- Routine testing for Fusobacterium necrophorum is not recommended, but maintain high suspicion for Lemierre syndrome in severely ill adolescents/young adults 1
- Treating chronic GAS carriers with antibiotics—they are unlikely to spread infection and at minimal risk for complications 1
- Relying on laboratory values (WBC, differential) alone—these have poor sensitivity and specificity for distinguishing bacterial from viral pharyngitis 2