Diagnostic and Treatment Approach to Autoimmune Diseases
Begin with a focused history targeting joint pain, skin manifestations, recent infections, and family history of autoimmune disorders, followed by physical examination evaluating joint involvement, skin changes, and splenomegaly. 1, 2
Initial Clinical Assessment
History and Physical Examination:
- Document specific symptoms including joint pain patterns, skin rashes, fatigue severity, fever, and recent viral illnesses 1, 2
- Inquire about exposure to lymphocyte-depleting therapies (fludarabine, ATG, corticosteroids, cytotoxic chemotherapy) 2
- Examine for joint swelling and deformities, skin manifestations (rashes, purpura, photosensitivity), and organomegaly 1, 2
Essential Laboratory Work-Up
First-Line Testing (Order Immediately):
- Complete blood count with differential to detect cytopenias (anemia, leukopenia, thrombocytopenia) 1, 2, 3
- Erythrocyte sedimentation rate (ESR) and C-reactive protein (CRP) to quantify inflammatory activity 1, 2
- Comprehensive metabolic panel including liver function tests (AST, ALT, alkaline phosphatase, bilirubin) and kidney function (creatinine, BUN) 1, 2
- Antinuclear antibodies (ANA) as the primary screening tool for systemic autoimmune diseases 1, 2
Second-Line Autoantibody Panel (Based on Clinical Suspicion):
- Rheumatoid factor (RF) and anti-cyclic citrullinated peptide (anti-CCP) antibodies for suspected rheumatoid arthritis 1
- Anti-dsDNA, anti-Smith, anti-RNP, anti-SSA, and anti-SSB antibodies for suspected systemic lupus erythematosus 2
- Complement levels (C3, C4, CH50) for suspected lupus or vasculitis 2
Disease-Specific Diagnostic Pathways
For Suspected Autoimmune Hepatitis:
- Measure serum immunoglobulins (particularly IgG elevation) and liver-specific autoantibodies (ANA, SMA, anti-LKM1, anti-LC1) 4, 1
- Liver biopsy is mandatory before initiating treatment unless contraindicated by severe coagulopathy or acute liver failure 4
- Use transjugular approach for biopsy when coagulopathy is present 4
- Look for interface hepatitis with plasma cell infiltration, hepatocellular rosette formation, and emperipolesis on histology 4
For Suspected Inflammatory Myositis:
- Measure creatine kinase (CK), AST, ALT, lactate dehydrogenase (LDH), and aldolase to detect muscle inflammation 1, 2
- Check troponin levels to evaluate for myocardial involvement 1, 2
- Perform muscle MRI to identify areas of inflammation 1
For Suspected Autoimmune Encephalitis:
- Perform lumbar puncture with CSF analysis including cell count, protein, glucose, IgG index, IgG synthesis rate, and oligoclonal bands 4
- Test neuronal autoantibodies in both serum and CSF 4, 2
- Consider brain FDG-PET when clinical suspicion is high but other studies are uninformative 4
Imaging Studies
Order Based on Clinical Presentation:
- Joint radiographs for suspected inflammatory arthritis 1
- Abdominal ultrasound or CT scan to evaluate for hepatosplenomegaly in systemic disease 1
- Muscle MRI for suspected inflammatory myopathies 1
- Brain MRI for suspected autoimmune encephalitis 4
Treatment Initiation
Corticosteroids as First-Line Therapy:
- For mild to moderate disease: Prednisone 0.5-1 mg/kg/day orally 2, 5
- For severe disease: Prednisone 1-2 mg/kg/day orally or methylprednisolone IV 2, 5
- In acute severe presentations (fulminant hepatitis, severe encephalitis, severe dysautonomia), initiate corticosteroids immediately without waiting for complete autoantibody results 4, 2
Alternative First-Line Options:
- IVIG (intravenous immunoglobulin) for agitated patients, those with bleeding disorders, or when steroids are contraindicated 4, 2
- Plasma exchange (5-10 sessions every other day) for severe hyponatremia, high thromboembolic risk, or associated demyelination 4, 2
Combined First-Line Therapy:
- Consider combination of corticosteroids plus IVIG or corticosteroids plus plasma exchange from the beginning in severe presentations (NMDAR-antibody encephalitis, new onset refractory status epilepticus, severe dysautonomia) 4
Specialist Referral
Early referral to appropriate subspecialty (rheumatology, neurology, hepatology) is mandatory and should occur within days of suspected diagnosis 1, 2
Monitoring and Follow-Up
Serial Laboratory Monitoring:
- Repeat ESR and CRP to assess treatment response 1, 2
- Monitor CBC for treatment-related cytopenias 2
- Assess organ function tests based on systems involved 1, 2
Treatment Escalation:
- If no improvement after 2-4 weeks of first-line therapy, add second-line immunosuppression (rituximab for antibody-mediated disease, cyclophosphamide for cell-mediated disease) 4, 2
Critical Pitfalls to Avoid
Common Diagnostic Errors:
- Never rely solely on autoantibody testing without clinical correlation—autoantibodies can be present in healthy individuals and absent in true disease 4
- Do not delay treatment while awaiting complete diagnostic work-up in severe presentations—initiate corticosteroids immediately 4, 2
- Autoantibody titers may vary during disease course; seronegative individuals at diagnosis may express autoantibodies later, so repeat testing if clinical suspicion remains high 4, 6
Pre-Treatment Requirements:
- Screen for infectious diseases (HIV, hepatitis B and C, tuberculosis) before starting immunosuppressive therapy 1, 2
- Send patient sera to reference laboratories for complete autoimmune serology when local facilities lack comprehensive testing capabilities 4, 6
Cancer Screening: