What is the recommended treatment for a patient diagnosed with Mycoplasma genitalium?

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Last updated: January 15, 2026View editorial policy

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Treatment for Mycoplasma genitalium

For confirmed Mycoplasma genitalium infection, treat with azithromycin 500 mg orally on day 1, followed by 250 mg orally once daily for days 2-5, which achieves 93-99% cure rates while minimizing macrolide resistance development. 1, 2, 3, 4

Diagnostic Testing Before Treatment

  • Always confirm M. genitalium infection with nucleic acid amplification testing (NAAT) before initiating therapy 1, 5
  • Test simultaneously for gonorrhea and chlamydia, as co-infections are common and require different treatment approaches 1, 5, 2
  • If available, perform macrolide resistance testing to guide therapy selection, as macrolide resistance now exceeds 50% in many regions 4, 6, 7

First-Line Treatment Algorithm

For Macrolide-Susceptible or Unknown Resistance Status

  • Azithromycin 500 mg orally on day 1, then 250 mg orally once daily for days 2-5 (total dose 1.5 g over 5 days) 1, 2, 3, 4, 6
  • This extended regimen achieves 95-99% cure rates and prevents resistance development 1, 3, 8
  • Critical pitfall to avoid: Do NOT use single-dose azithromycin 1 g, as cure rates have dropped from 85% to 67% and this regimen selects for macrolide resistance in 100% of treatment failures 1, 8

For Macrolide-Resistant Infections (Second-Line)

  • Moxifloxacin 400 mg orally once daily for 7 days for uncomplicated infections 3, 4, 6, 7
  • Achieves 92% cure rate in macrolide-resistant cases 7
  • Extend to 14 days for complicated infections (pelvic inflammatory disease, epididymitis) 3, 4

For Treatment Failures After Both Azithromycin and Moxifloxacin (Third-Line)

  • Doxycycline 100 mg orally twice daily for 14 days may cure 40-70% 4
  • Pristinamycin 1 g orally four times daily for 10 days achieves approximately 75% cure rate 4

Alternative Approach When Resistance Testing Unavailable

If macrolide resistance testing is not feasible and treatment has failed:

  • Doxycycline 100 mg orally twice daily for 7 days, followed by azithromycin 1 g on day 1, then 500 mg once daily for 3 days 6
  • This sequential approach reduces organism load before azithromycin exposure, potentially decreasing resistance selection 4, 6

Critical Treatment Considerations

Do NOT use doxycycline monotherapy for confirmed M. genitalium, as it achieves only 30-40% cure rates and should not be first-line therapy 1, 5, 2, 3, 4, 8

Partner Management and Sexual Activity Restrictions

  • Patients must abstain from sexual intercourse for 7 days after completing single-dose therapy or until completion of multi-day regimens 1, 5, 2
  • All sexual partners require evaluation and treatment, even if asymptomatic, to prevent reinfection 1, 5, 2
  • Dispense medications on-site when possible and directly observe the first dose to maximize compliance 1

Follow-Up Requirements

  • Test of cure is recommended 3-6 weeks after treatment completion due to high reinfection rates 1
  • Testing at less than 3 weeks may yield false-positive results with NAAT due to detection of non-viable organisms 1
  • Patients should return for evaluation if symptoms persist or recur, as this indicates treatment failure requiring resistance testing and alternative therapy 1, 5
  • Repeat testing at 3-6 months is recommended due to high reinfection rates 1

Key Clinical Pitfalls to Avoid

  • Never use azithromycin 1 g single dose, as this dramatically increases macrolide resistance (100% of treatment failures develop resistance) 8
  • Do not treat empirically without testing when NAAT is available, as resistance patterns vary geographically 4, 6
  • Do not perform test of cure before 3 weeks, as false positives are common 1
  • Ensure partner treatment occurs simultaneously to prevent ping-pong reinfection 1, 5, 2

References

Guideline

Treatment for Mycoplasma genitalium

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Guideline

Treatment of Mycoplasma genitalium and Ureaplasma Infections

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

2016 European guideline on Mycoplasma genitalium infections.

Journal of the European Academy of Dermatology and Venereology : JEADV, 2016

Research

2021 European guideline on the management of Mycoplasma genitalium infections.

Journal of the European Academy of Dermatology and Venereology : JEADV, 2022

Guideline

Treatment for Mycoplasma Genitalium

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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