What are the risks and benefits of Fine Needle Aspiration (FNA) for a patient with a thyroid nodule?

Medical Advisory BoardAll articles are reviewed for accuracy by our Medical Advisory Board
Educational purpose only • Exercise caution as content is pending human review
Article Review Status
Submitted
Under Review
Approved

Last updated: January 16, 2026View editorial policy

Personalize

Help us tailor your experience

Which best describes you? Your choice helps us use language that's most understandable for you.

Risks and Benefits of Fine Needle Aspiration (FNA) of Thyroid Nodules

Primary Recommendation

Fine needle aspiration is the most accurate and cost-effective diagnostic method for thyroid nodules, with a diagnostic accuracy approaching 95%, and its benefits in preventing unnecessary surgery and identifying malignancy far outweigh its minimal risks. 1, 2, 3


Benefits of FNA

Diagnostic Accuracy and Clinical Impact

  • FNA achieves approximately 95% diagnostic accuracy for distinguishing benign from malignant thyroid nodules, making it the gold standard for preoperative diagnosis 1, 2, 3

  • Before routine FNA use, only 14% of resected thyroid nodules were malignant; with widespread FNA implementation, >50% of resected nodules are now malignant, demonstrating its effectiveness in reducing unnecessary surgery 4

  • FNA is the most reliable method for risk stratification, allowing appropriate triage of patients who need surgery versus those who can be safely observed 1, 3, 5

Safety and Practical Advantages

  • FNA is recognized as a safe, cost-effective procedure that can be performed in the office setting with minimal patient discomfort 1, 2, 6

  • Ultrasound guidance enhances accuracy, allows real-time needle visualization, confirms accurate sampling, and is superior to palpation-guided biopsy in terms of accuracy, patient comfort, and cost-effectiveness 1

  • The procedure enables marker clip placement for future reference and reduces sampling errors 1

Clinical Decision-Making Benefits

  • FNA results directly guide surgical planning, determining whether total thyroidectomy, lobectomy, or observation is appropriate 1, 5

  • Molecular testing can be performed on FNA samples (BRAF, RAS, RET/PTC, PAX8/PPARγ) for indeterminate results, with 97% of mutation-positive nodules being malignant 1, 2

  • The Bethesda classification system provides standardized risk stratification (Categories I-VI) that directly determines management pathways 1


Risks and Limitations of FNA

False-Negative Results

  • The false-negative rate is approximately 10.2% after a single benign FNA, which represents the most significant clinical risk 7

  • This false-negative rate decreases to 4.5% with a second benign FNA, supporting repeat aspiration in suspicious cases 7

  • 90% of patients with false-negative FNA results had suspicious sonographic features (size >4 cm, calcifications, increased vascularity), indicating that clinical and ultrasound findings should not be overridden by reassuring cytology 1, 7

Nondiagnostic and Indeterminate Results

  • Nondiagnostic/inadequate samples occur in 5-20% of cases (Bethesda Category I), requiring repeat FNA under ultrasound guidance 1, 3

  • Indeterminate results (Bethesda III: Atypia of Undetermined Significance/Follicular Lesion of Undetermined Significance, and Bethesda IV: Follicular Neoplasm) represent a major limitation, as follicular carcinoma cannot be distinguished from follicular adenoma on cytology alone 1, 3

  • Follicular neoplasms have a malignancy rate of 12-34% depending on subcategory, often requiring surgical excision for definitive diagnosis 1

Procedural Risks

  • FNA is generally safe with minimal complications, though specific complication rates are not extensively detailed in the guidelines 1, 5, 6

  • The procedure may cause minor discomfort, bleeding, or rarely infection, but these are uncommon and typically self-limited 5


Clinical Algorithm for FNA Decision-Making

When to Perform FNA

  • Any nodule >1 cm should undergo FNA, regardless of ultrasound characteristics or thyroid function 1, 2

  • Nodules <1 cm require FNA only if suspicious ultrasound features PLUS high-risk clinical factors are present (history of head/neck irradiation, family history of thyroid cancer, suspicious cervical lymphadenopathy, age <15 years) 1

  • Any nodule >4 cm requires FNA regardless of ultrasound appearance due to increased false-negative rate 1

High-Risk Ultrasound Features Warranting FNA

  • Microcalcifications (highly specific for papillary thyroid carcinoma) 1
  • Marked hypoechogenicity (solid nodules darker than surrounding thyroid) 1
  • Irregular or microlobulated margins 1
  • Absence of peripheral halo 1
  • Central hypervascularity (chaotic internal vascular pattern) 1
  • Solid composition (higher malignancy risk than cystic) 1

Management Based on FNA Results

  • Bethesda II (Benign, 1-3% malignancy risk): Surveillance with repeat ultrasound at 12-24 months; surgery only for compressive symptoms or nodules >4 cm 1

  • Bethesda III/IV (Indeterminate): Consider molecular testing or repeat FNA; surgery may be needed for definitive diagnosis 1, 3

  • Bethesda V/VI (Suspicious/Malignant): Immediate referral for total or near-total thyroidectomy with pre-operative lymph node assessment 1, 2


Critical Pitfalls to Avoid

  • Never override a suspicious clinical presentation or ultrasound findings based solely on benign FNA results, as false-negative rates can reach 10-33% in certain contexts 1, 7

  • Reaspiration should be strongly considered in patients with sonographically suspicious nodules despite initial benign cytology, particularly those with size >4 cm, calcifications, or increased vascularity 7

  • Do not perform FNA on nodules <1 cm without high-risk features, as this leads to overdiagnosis and overtreatment of clinically insignificant papillary microcarcinomas 1

  • Thyroid function tests (TSH, T3, T4) should not be used to determine malignancy risk, as most thyroid cancers present with normal thyroid function 1, 2

  • Radionuclide scanning is not helpful in euthyroid patients for determining malignancy; decisions should be based on ultrasound features and FNA results 1

References

Guideline

Ultrasound-Guided FNA Biopsy for Thyroid Nodules

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Guideline

Best Confirmatory Investigation for Thyroid Nodule >1.3 cm with Normal Thyroid Function

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Thyroid fine-needle aspiration biopsy: progress, practice, and pitfalls.

Endocrine practice : official journal of the American College of Endocrinology and the American Association of Clinical Endocrinologists, 2003

Research

Thyroid nodule fine-needle aspiration.

Seminars in ultrasound, CT, and MR, 2012

Research

Update in thyroid fine needle aspiration.

Endocrine pathology, 2011

Research

Is one benign fine needle aspiration enough?

Annals of surgical oncology, 2012

Related Questions

What is the next step in managing an elderly patient with a thyroid nodule and two inconclusive fine-needle aspiration (FNA) biopsies?
From which thyroid nodule (Fine Needle Aspiration) FNA should be taken in a patient with a 2x1cm mass on the right side and a 3x2cm mass on the left side?
What is the best next step for a patient with a 2x2 cm solid thyroid nodule, normal Thyroid-Stimulating Hormone (TSH) levels, and elevated Thyroxine (T4) levels?
What is the diagnosis and treatment for a benign follicular (thyroid) nodule?
Can a patient request partial thyroid removal instead of Fine Needle Aspiration (FNA)?
What is the best course of action for a 7-year-old child with leukocyturia (high leukocytes in urine), intermittent fever, and abdominal pain, but no bacterial growth in urine culture?
Should a patient with diabetes and CKD, who has anemia, normal ferritin, and low TSAT, start oral iron therapy one month after IV iron treatment?
What are the differential diagnoses for a patient presenting with a severe, pruritic, and exudative rash?
Is a follow-up test necessary after treatment for latent tuberculosis (TB) in individuals with compromised immune systems, such as those with Human Immunodeficiency Virus/Acquired Immunodeficiency Syndrome (HIV/AIDS)?
What are the next steps in managing a patient with treatment-resistant bipolar disorder on haloperidol and clozapine, with normal EKG, troponin, and CRP results?
What is the expected timeframe for foreskin retraction in a male child or adolescent with no significant medical history, using topical steroids such as betamethasone valerate (corticosteroid) or clobetasol propionate (corticosteroid) applied once daily?

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

Have a follow-up question?

Our Medical A.I. is used by practicing medical doctors at top research institutions around the world. Ask any follow up question and get world-class guideline-backed answers instantly.