What is the appropriate initial workup for a patient who has been sexually assaulted?

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Initial Workup for Sexual Assault Patient (SANE Examination)

The initial workup for a sexual assault patient should include forensic evidence collection (if within 4-7 days of assault), comprehensive STI testing from all sites of penetration, pregnancy testing and emergency contraception, baseline serology for HIV/hepatitis B/syphilis, prophylactic antimicrobial therapy, hepatitis B and HPV vaccination, and immediate psychological assessment with trauma-informed counseling. 1, 2

Forensic Evidence Collection

Timing is critical for forensic examination:

  • Evidence collection is most useful within 4 days of assault and possibly longer with DNA amplification techniques 1
  • Between 4-7 days, contact local authorities to determine if evidence collection remains useful 1
  • After 1 week, proceed with medical examination and treatment without forensic collection 1

Before examination, advise patients to:

  • Not wash clothes, bathe, or shower until examined 1
  • Store clothes in paper (not plastic) bags 1

STI Testing at Initial Visit

Nucleic acid amplification tests (NAATs) should be performed from all sites of penetration or attempted penetration with sensitivity 86.1%-100% and specificity 97.1%-100% 2:

  • Gonorrhea and Chlamydia NAATs from pharynx, rectum, vagina (in females), and urethra (in males) 1, 2
  • Wet mount examination of vaginal swab for Trichomonas, bacterial vaginosis, and yeast if discharge or malodor present 1, 2
  • Baseline serology for HIV, hepatitis B, and syphilis 1

Important caveat: Initial testing may be negative if performed too soon after assault, as organisms may not have reached sufficient concentrations 1

Prophylactic Treatment (Administered at Initial Visit)

The CDC recommends empiric antimicrobial prophylaxis for all patients with vaginal, anal, or oral penetration (with ejaculation) 1:

Recommended Regimen:

  • Ceftriaxone 250 mg IM (single dose) 1
  • PLUS Azithromycin 1 g orally (single dose) 1
  • PLUS Metronidazole 2 g orally (single dose) OR Tinidazole 2 g orally 1

Clinical pearl: If alcohol recently ingested or emergency contraception provided, metronidazole/tinidazole can be taken at home to minimize side effects and drug interactions 1

Pregnancy Prevention

Emergency contraception should be offered to all females with vaginal penetration or genital contact with ejaculate 1:

  • Perform baseline urine pregnancy test 1
  • Levonorgestrel 1.5 mg orally (both 0.75 mg tablets taken together) is more effective with fewer adverse effects than older regimens 1

Vaccination

Hepatitis B vaccination should be administered at initial visit if not previously vaccinated, with follow-up doses at 1-2 months and 4-6 months 1:

  • If assailant known to be HBsAg-positive, give both vaccine and HBIG 1

HPV vaccination recommended for females aged 9-26 years and males aged 9-21 years (through age 26 for MSM), with follow-up doses at 1-2 months and 6 months 1

HIV Post-Exposure Prophylaxis (PEP)

HIV PEP should be individualized based on risk assessment 1:

  • Consult HIV specialist for high-risk exposures 1
  • Discuss risks/benefits and toxicity 1
  • Provide 3-7 days medication initially until tolerance assessed 1
  • Baseline CBC, chemistry panel, and HIV testing required 1

Physical Examination Findings

Visual inspection should document 1:

  • Genital, perianal, and oral areas for discharge, bleeding, irritation, warts, ulcerative lesions 1
  • Common injury patterns in assault victims: posterior fourchette, labia minora, hymen, fossa navicularis with tears, abrasions, and ecchymosis 3
  • 68% of assault victims show genital trauma at mean 3.1 sites 3

Psychological Assessment

Immediate psychological support is critical 1:

  • Screen for suicidal ideation and self-harm behavior 1
  • Up to 80% of rape victims develop post-traumatic stress disorder 1
  • Assess for acute symptoms: disbelief, anxiety, fear, emotional lability, guilt 1
  • Refer to trauma-focused cognitive behavioral therapy 1
  • Male victims require specific counseling regarding masculinity and sexual orientation concerns 1

Follow-Up Schedule

1-2 week follow-up 1:

  • Assess injury healing and medication adherence 1
  • Repeat STI testing if prophylaxis not given or symptoms develop 1
  • Mental health assessment and counseling arrangement 1

2-week follow-up 1:

  • Pregnancy testing 1
  • Repeat physical examination 1

6 weeks, 3 months, and 6 months follow-up 1:

  • Repeat HIV and syphilis serology if initial tests negative and assailant infection status unknown 1
  • Complete vaccination series 1

Critical pitfall: Follow-up compliance is often poor in emergency department patients, so referral to medical home or specialty sexual assault center with patient consent improves outcomes 1

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Management of Sexually Transmitted Infections

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Patterns of genital injury in female sexual assault victims.

American journal of obstetrics and gynecology, 1997

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Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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