Diagnosing Long COVID: A Structured Approach
Long COVID is fundamentally a diagnosis of exclusion that requires symptoms persisting beyond 12 weeks after acute COVID-19 infection, with the critical first step being to rule out life-threatening complications and alternative diagnoses before attributing symptoms to post-acute sequelae. 1
Temporal Framework for Diagnosis
The diagnostic approach depends on timing from acute infection 1:
- 4-12 weeks post-infection: Classified as "post-acute COVID" - assess on a case-by-case basis according to symptom severity and trajectory 1
- ≥12 weeks post-infection: Threshold for formal Long COVID diagnosis when persistent symptoms warrant comprehensive investigation 1, 2
Diagnostic Certainty Classification
Long COVID diagnosis is stratified by the strength of evidence for prior SARS-CoV-2 infection 1:
- Confirmed: Typical symptoms with positive laboratory results (PCR or antigen test)
- Probable: Typical symptoms with negative laboratory results but suggestive epidemiology
- Possible: Typical symptoms with negative laboratory results and negative epidemiology
A prior positive COVID-19 test is NOT required to diagnose Long COVID - clinical diagnosis based on typical symptoms and epidemiological context is sufficient. 3, 4
Step 1: Exclude Life-Threatening Conditions First
Before considering Long COVID, immediately rule out serious complications that require urgent intervention 1, 5, 6:
- Thromboembolic events (pulmonary embolism, deep vein thrombosis)
- Myocarditis or other cardiac complications
- Encephalitis or severe neurological manifestations
- Previously overlooked malignancy
- Severe hypoxemia (oxygen saturation ≤93% at rest) 5
- Respiratory distress (respiratory rate >30 breaths/minute) 5
Step 2: Obtain Targeted Clinical History
Document specific elements to differentiate Long COVID from other conditions 1, 5:
- Pre-existing conditions that may explain current symptoms
- Iatrogenic causes from treatments during acute infection
- Complications directly related to the acute COVID-19 episode
- Symptom timeline: onset, duration, pattern (persistent vs. relapsing-remitting)
- Functional impact: effect on daily activities, work capacity, quality of life 5, 3
Key Symptom Clusters to Document
The most common Long COVID symptoms with their prevalence ranges 1:
- Fatigue: 31-58% of patients
- Dyspnea: 24-40%
- Cognitive impairment ("brain fog"): 12-35%
- Sleep disturbances: 11-44%
- Musculoskeletal pain: 9-19%
- Anosmia/dysgeusia: 10-22%
- Cough: 7-29%
- Chest pain: 6-17%
Step 3: Basic Laboratory Assessment
All patients with suspected Long COVID should receive a basic laboratory panel 1, 6:
- Complete blood count
- C-reactive protein
- Kidney function tests (creatinine, BUN)
- Liver function tests (ALT, AST, bilirubin)
Symptom-Specific Additional Testing
Order these tests only when clinically indicated by specific symptoms 1, 5:
For cardiac symptoms (chest pain, palpitations):
- Troponin
- CPK-MB
- B-type natriuretic peptide (BNP)
For suspected thyroiditis:
- Complete thyroid function tests (TSH, free T4, free T3)
For patients at diabetes risk:
- Fasting glucose
- Glycated hemoglobin (HbA1c)
Tests to AVOID
Do NOT routinely order 1:
- D-dimer in patients without respiratory symptoms (limited utility and high false-positive rate)
- Blood gases even with decreased oxygen saturation (limited benefit according to guidelines)
- Extensive autoimmune panels without specific clinical indication
Important caveat: Laboratory abnormalities are uncommon in Long COVID - normal labs do not exclude the diagnosis. 1
Step 4: Assess for Risk Factors
Document established risk factors that increase likelihood of Long COVID 1, 6:
Consistent risk factors with strong evidence:
- Female sex: approximately 2-fold increased risk (OR 1.3-5) 1, 6
- Severe acute COVID-19: strongest association with persistent fatigue 1
Inconsistent risk factors (mixed evidence):
Step 5: System-Specific Evaluation
After basic assessment, consider targeted evaluation based on predominant symptom patterns 1:
- Respiratory symptoms: Pulmonary function testing, chest imaging at 12-week mark 5
- Cardiac symptoms: ECG, echocardiography if indicated
- Neurological symptoms: Cognitive assessment, neuropsychological testing if severe
- Autonomic symptoms: Orthostatic vital signs, tilt table testing for suspected POTS
Common Diagnostic Pitfalls to Avoid
Premature diagnosis: Avoid labeling symptoms as Long COVID before 12 weeks unless severe and progressive 1, 2
Over-investigation at early timepoints: Fatigue and dyspnea at 1.5-4 weeks are expected acute illness symptoms and do not warrant extensive workup unless red flags present 2
Dismissing symptoms: Many patients have had symptoms dismissed by clinicians - validation of their experience is essential even when diagnosis is uncertain 5, 3
Missing alternative diagnoses: Always maintain clinical vigilance for other conditions that may mimic Long COVID, particularly in patients with atypical presentations 1
Requiring positive COVID test: Do not exclude Long COVID diagnosis solely based on lack of prior positive test, especially in patients infected early in pandemic when testing was limited 3, 4
Documentation for Diagnosis
Formal Long COVID diagnosis requires 1:
- Symptoms persisting ≥12 weeks from acute infection
- No alternative explanation after appropriate investigation
- Documentation of functional impairment
- Classification of diagnostic certainty (confirmed/probable/possible)
The diagnosis should be revisited if symptoms evolve or new concerning features develop, as this may indicate complications requiring different management. 1, 5