MTHFR Lab Interpretation Guide
Understanding Your MTHFR Test Results
MTHFR testing identifies genetic variants that affect folate metabolism and homocysteine levels, with the two most common mutations being C677T and A1298C—but the genotype alone doesn't determine treatment; you must measure plasma homocysteine levels to guide clinical decisions. 1, 2
The Two Main MTHFR Variants
C677T Mutation:
- 677CC (Normal/Wild-type): No mutation present; normal enzyme function 2
- 677CT (Heterozygous): One copy of the mutation; found in 30-40% of the general population; mildly reduced enzyme activity 1, 2
- 677TT (Homozygous): Two copies of the mutation; found in 10-15% of the general population; significantly reduced enzyme activity (up to 70% reduction); highest risk for elevated homocysteine 1, 2, 3
A1298C Mutation:
- 1298AA (Normal): No mutation present 2
- 1298AC (Heterozygous): One copy of the mutation; minimal clinical impact alone 2
- 1298CC (Homozygous): Two copies of the mutation; less impact on homocysteine than 677TT 2
Compound Heterozygous (677CT + 1298AC): Occurs in approximately 5% of individuals; increases homocysteine levels more than single heterozygous mutations 2
Critical Point: Genotype ≠ Disease Risk
The MTHFR genotype by itself does NOT determine your risk—you must measure homocysteine levels. 1, 2 Homozygosity for the 677TT variant accounts for only about one-third of hyperhomocysteinemia cases, meaning many people with elevated homocysteine have normal MTHFR genes, and many with MTHFR mutations have normal homocysteine. 1
Homocysteine Levels: The Key Clinical Marker
Normal Range: <10 μmol/L 1
Interpretation:
- <10 μmol/L: Normal; no treatment needed regardless of MTHFR genotype 1
- 10-15 μmol/L: Mild elevation; consider treatment if 677TT genotype or cardiovascular risk factors present 1, 2
- >15 μmol/L: Moderate-to-severe elevation; treatment recommended 1, 2
Important: Confirm any single elevated homocysteine value with repeat fasting measurement (≥8 hours) before initiating treatment. 2, 4
Risk Stratification by Homocysteine Level
For every 5 μmol/L increase in homocysteine, stroke risk increases by 59%. 4 Conversely, for every 3 μmol/L decrease in homocysteine, stroke risk decreases by 24%. 4
Homozygosity for 677TT increases risk for hyperhomocysteinemia, which is associated with 2-3 fold increased risk for atherosclerotic vascular disease and stroke. 2, 4, 3
Clinical Context Matters
Age and Gender Considerations
Age-related factors:
- Men aged 40-59 years: 29% have hyperhomocysteinemia 1
- Women aged 40-59 years: 21% have hyperhomocysteinemia 1
- Men aged ≥60 years: 43% have hyperhomocysteinemia 1
- Women aged ≥60 years: 47% have hyperhomocysteinemia 1
Gender differences: Women with MTHFR mutations may have different cardiovascular risk profiles than men, though both benefit from homocysteine-lowering treatment when levels are elevated. 1, 5
Thrombosis History
Without thrombosis history: MTHFR mutation alone does NOT warrant anticoagulation; focus on measuring and treating elevated homocysteine with vitamins, not blood thinners. 2
With thrombosis history: The 677TT genotype increases venous thrombosis risk (odds ratio 2.93), and this risk increases 20-fold when combined with Factor V Leiden. 1, 3 However, treatment still focuses on homocysteine reduction, not routine anticoagulation based on genotype alone. 2
Treatment Algorithm Based on Results
Step 1: Measure Baseline Labs BEFORE Treatment
Before starting any supplementation, you must check: 2, 4
- Serum and erythrocyte folate
- Serum vitamin B12 (cobalamin)
- Serum or urine methylmalonic acid (to rule out B12 deficiency)
- Fasting plasma homocysteine (≥8 hours fasting)
Critical pitfall: Folate supplementation can mask B12 deficiency's hematologic signs while allowing irreversible neurological damage to progress—always rule out B12 deficiency first. 2, 4
Step 2: Treatment Based on Genotype + Homocysteine Level
For 677TT Homozygotes with Elevated Homocysteine:
Use 5-methyltetrahydrofolate (5-MTHF), NOT regular folic acid. 2, 4 The 677TT genotype reduces enzyme activity by up to 70%, so folic acid (which requires MTHFR enzyme conversion) is less effective. 2
- 5-MTHF: 0.4-5 mg daily (reduces homocysteine by 25-30%)
- Methylcobalamin or hydroxycobalamin: 1 mg weekly (provides additional 7% homocysteine reduction)
- Vitamin B6: 50 mg daily (supports transsulfuration pathway)
- Riboflavin: Dose per product labeling (particularly effective for TT genotype)
For 677CT Heterozygotes or 1298AC with Elevated Homocysteine:
Standard supplementation may suffice: 2
- 5-MTHF or folic acid: 400-800 μg daily
- Vitamin B12: 1 mg weekly
- Vitamin B6: 50 mg daily
For Normal Homocysteine (<10 μmol/L) Regardless of Genotype:
No treatment needed. 2 MTHFR genotype alone without elevated homocysteine does not require supplementation.
Step 3: Dietary Recommendations
Emphasize foods naturally rich in folate: 2, 4
- Leafy greens (spinach, kale, romaine lettuce)
- Legumes (lentils, chickpeas, black beans)
- Citrus fruits
- Nuts
- Organ meats (high in natural folates)
Avoid relying on folic acid-fortified foods if you have the 677TT genotype—these contain synthetic folic acid that requires enzyme conversion. 2
Special Clinical Situations
Patients on Methotrexate
All patients on methotrexate, especially those with MTHFR mutations, should receive folate supplementation (≥5 mg/week to 5 mg daily) to reduce gastrointestinal side effects, protect against elevated liver function tests, and reduce drug discontinuation. 2, 4
Pregnancy and Adverse Outcomes
MTHFR 677TT is associated with recurrent spontaneous abortion, chromosomal abnormalities, cleft lip/palate, and brain dysplasia in females. 5 MTHFR 677TT in males is associated with partner's recurrent spontaneous abortion, infertility, and chromosomal abnormalities. 5 Preconception counseling should include homocysteine measurement and appropriate supplementation with 5-MTHF before conception. 5
Cardiovascular Disease Context
In patients with established cardiovascular disease or multiple risk factors: 1, 4
- Folic acid supplementation reduces stroke risk by 18-25% 4
- The 677TT genotype confers odds ratio of 5.52 for arterial disease in the absence of traditional risk factors (hyperlipidemia, hypertension, diabetes) 3
- Treatment with 5-MTHF is preferred over folic acid for homocysteine reduction 2, 4
Common Pitfalls to Avoid
Using folic acid instead of 5-MTHF in 677TT homozygotes—folic acid requires conversion by the deficient enzyme, making it less effective. 2
Using cyanocobalamin instead of methylcobalamin or hydroxycobalamin—active forms are more effective for homocysteine reduction. 2
Starting folate without checking B12 status first—can mask B12 deficiency while neurological damage progresses. 2, 4
Treating based on genotype alone without measuring homocysteine—genotype doesn't predict homocysteine levels reliably. 1, 2
Prescribing anticoagulation based solely on MTHFR mutation—genotype alone without thrombosis history does not warrant anticoagulation. 2
Failing to include riboflavin in the regimen for TT homozygotes—riboflavin is particularly important for this genotype. 2
Not confirming elevated homocysteine with repeat fasting measurement—single values can be falsely elevated. 2, 4
Monitoring and Follow-up
Recheck fasting homocysteine 8-12 weeks after starting supplementation to assess treatment response. 2, 4 TT homozygotes respond better when both folate and B12 levels are above median values, suggesting they may need higher doses or active forms. 2