How should suspected cytomegalovirus infection be diagnosed and managed in immunocompromised adults, transplant recipients, pregnant women, and newborns?

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Last updated: February 9, 2026View editorial policy

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CMV Diagnosis and Management in High-Risk Populations

Diagnose suspected CMV infection using quantitative PCR (viral load) from blood as the first-line test in all immunocompromised adults, transplant recipients, pregnant women, and newborns, and distinguish between CMV infection (viremia alone) versus CMV disease (viremia plus attributable clinical symptoms). 1, 2

Diagnostic Approach by Population

Transplant Recipients

Use quantitative molecular assays (PCR) for CMV monitoring, not serology, as the preferred diagnostic method. 1, 3

  • CMV active infection is defined as viral replication detected by quantitative PCR, antigenemia assay, viral culture, or histopathologic evidence, regardless of symptoms 4, 1
  • CMV disease requires both evidence of CMV infection PLUS attributable clinical symptoms, subdivided into CMV syndrome or tissue-invasive disease 4, 1

Implement monthly quantitative PCR monitoring for the first year post-transplant for all at-risk patients (except CMV donor-negative/recipient-negative combinations). 1, 3, 2

  • The highest risk group is CMV donor-positive/recipient-negative (D+/R-) 4
  • Use the same testing method consistently throughout monitoring—either a standardized commercially available assay or a core laboratory—to ensure accurate comparisons 3

Diagnostic Criteria for CMV Disease in Transplant Recipients

Probable CMV syndrome requires one or more of the following clinical/laboratory findings PLUS evidence of CMV in blood by PCR, antigenemia, or viral culture: 4, 1

  • Fever >38°C for at least 2 days
  • New or increased malaise
  • Leukopenia
  • ≥5% atypical lymphocytes
  • Thrombocytopenia
  • Elevation of hepatic transaminases (ALT or AST) to 2× upper limit of normal (in non-liver transplant recipients)

Definite CMV syndrome requires all the above clinical/laboratory findings with no other identifiable cause of symptoms 4, 1

Probable tissue-invasive CMV disease (e.g., pneumonia, gastrointestinal disease) requires organ-specific symptoms/signs without other documented cause PLUS CMV detected in blood and/or affected site (BAL fluid for pneumonia, endoscopic biopsy for GI disease) by PCR, antigenemia, or viral culture 4, 1

Definite tissue-invasive CMV disease requires detection of CMV in affected tissue by culture, immunohistochemistry, or in situ hybridization 4, 1

HIV-Infected Adults and Other Immunocompromised Patients

Order quantitative CMV DNA PCR from blood as the first-line test—serology (including IgM) has severely limited diagnostic value due to high false-positive rates and inability to distinguish active from latent infection. 2

  • Quantitative PCR has sensitivity of 82-100% and specificity of 86-100% for active CMV infection 2
  • PCR can detect CMV during neutropenia when antigenemia testing fails due to low leukocyte counts 3, 2
  • Over 90% of adults have positive CMV IgG from past exposure, making serology useless for diagnosing active infection 2

CMV retinitis is the most common manifestation in HIV-infected patients with CD4+ counts <50 cells/µL 4

  • Occurs as unilateral disease in two-thirds of patients at presentation 4
  • Requires ophthalmologic examination for diagnosis—characteristic appearance is full-thickness necrotizing retinitis 4
  • Regular ophthalmologic follow-up is needed even after immune recovery, as relapse can occur at CD4+ counts as high as 1,250 cells/µL 4

For organ-specific CMV disease:

  • CMV encephalitis: Diagnose using CSF PCR (sensitivity 82-100%, specificity 86-100%) 2
  • CMV pneumonitis: Diagnose using BAL fluid PCR plus serum PCR (negative BAL effectively rules out CMV pneumonia with >99% negative predictive value) 2
  • CMV colitis: Serology has only 50.8% pooled sensitivity—tissue diagnosis or PCR is essential 2

Pregnant Women

Following primary CMV infection in the first 12 weeks of pregnancy, start valaciclovir (valacyclovir) to reduce the risk of fetal infection. 5

  • Test for CMV only in women who develop symptoms of influenza, glandular fever, or hepatitis during pregnancy, or when routine ultrasound detects fetal anomalies suggesting possible CMV infection 5
  • The risk of fetal harm is greatest following primary CMV infection in early pregnancy and appears very low following infection after 12 weeks of pregnancy 5

When maternal CMV infection is confirmed:

  • If fetal infection is confirmed by amniocentesis, offer regular ultrasound scans every 2-3 weeks until birth with detailed assessment of the fetal brain 5
  • Offer MRI scan of the fetal brain at 28-32 weeks of gestation (sometimes repeated 3-4 weeks later) to assess for brain damage 5
  • If maternal infection occurs but fetal infection is not confirmed, still offer repeated ultrasound scans every 2-3 weeks until birth 5

Newborns

Test all babies born to women with confirmed or suspected CMV infection using a urine or saliva sample within the first 21 days of life. 5

  • Around 1 in 8 babies born with CMV infection will have clinically detectable signs at birth (jaundice, rash, enlarged liver/spleen, small brain, small for gestational age) 5
  • The remaining 7 out of 8 infected babies will not have features detectable by clinical examination alone 5

All infants with CMV infection at birth should be followed up at minimum until 2 years of age or later to monitor hearing and brain development. 5

In newborns with symptomatic CMV infection at birth, treat with valganciclovir or ganciclovir—this reduces hearing loss in 5 out of 6 babies and improves long-term brain development outcomes in some. 5

Critical Pitfalls to Avoid

Do not rely on serology alone in immunocompromised patients—viral load testing or tissue diagnosis is essential. 2

Remember that CMV detection does not equal CMV disease—clinical correlation is essential, particularly when using highly sensitive molecular methods. 1, 3

Exclude acute rejection as the cause of clinical symptoms before diagnosing CMV disease, especially if the affected organ is the allograft. 1

Document superinfection or coinfection with other pathogens, as these may occur concurrently with CMV. 1

Ensure consistent use of the same quantitative assay throughout monitoring, as different assays have different thresholds and cannot be directly compared. 3

Consider obtaining samples for antiviral resistance testing (UL97 and UL54 mutations) for patients who develop CMV disease, especially if antiviral prophylaxis was used. 3

Prevention Strategies

In transplant recipients, use either pre-emptive therapy (treat when viremia detected) or universal prophylaxis—establish a consistent strategy across all centers before beginning immunosuppression. 4

For pregnant women, especially those in regular contact with young children, provide education about hygiene-based measures to reduce CMV transmission risk, particularly handwashing. 5

References

Guideline

Diagnostic Criteria for CMV in Post-Kidney Transplant Patients

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Guideline

CMV Diagnosis in Immunocompromised Patients

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Guideline

CMV Diagnosis and Monitoring Post-Renal Transplant

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

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Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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