What is the recommended treatment for uncomplicated genital Chlamydia trachomatis infection?

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Last updated: February 20, 2026View editorial policy

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Treatment for Chlamydia

For uncomplicated genital chlamydia in non-pregnant adults, treat with doxycycline 100 mg orally twice daily for 7 days as first-line therapy, achieving 97-98% cure rates, or azithromycin 1 g orally as a single dose when adherence to a 7-day regimen is uncertain. 1, 2, 3

First-Line Treatment Selection

Choose between two equally effective options based on patient-specific factors:

  • Doxycycline 100 mg orally twice daily for 7 days is preferred when:

    • Cost is a primary concern (significantly less expensive than azithromycin) 2
    • The patient can reliably complete a 7-day course 2
    • Treating rectal chlamydia (94-100% cure vs. 79-87% with azithromycin) 1
    • Both regimens achieve 97-98% cure rates for genital infections 1, 2, 3
  • Azithromycin 1 g orally as a single dose is preferred when:

    • Compliance with multi-day regimens is questionable 1, 2
    • Follow-up is unpredictable 1, 2
    • Directly observed therapy is needed 1, 2
    • Treating populations with erratic health-care-seeking behavior (homeless individuals, young adults) 1, 2
    • Despite equivalent efficacy in trials, real-world adherence studies show only 77-85% of patients complete the full doxycycline course 4

Critical Management Steps

Medication dispensing and observation:

  • Dispense medications on-site when possible and directly observe the first dose to maximize compliance 1, 2

Sexual abstinence requirements:

  • Patients must abstain from all sexual intercourse for 7 days after initiating treatment 1, 2, 3
  • Continue abstinence until all sex partners have completed treatment 1, 2, 3

Partner management (mandatory):

  • All sex partners from the preceding 60 days must be evaluated, tested, and empirically treated 1, 2, 3
  • Treat the most recent partner even if last sexual contact was >60 days before diagnosis 1
  • Failing to treat partners leads to reinfection in up to 20% of cases 1

Treatment During Pregnancy

Azithromycin 1 g orally as a single dose is the preferred treatment during pregnancy. 1, 2, 3

Alternative regimens when azithromycin cannot be used:

  • Amoxicillin 500 mg orally three times daily for 7 days 1, 2
  • Erythromycin base 500 mg orally four times daily for 7 days 1, 2

Absolute contraindications in pregnancy:

  • Doxycycline (teratogenic risk) 1, 2, 3
  • All fluoroquinolones including ofloxacin and levofloxacin 1, 2, 3
  • Erythromycin estolate (drug-related hepatotoxicity) 1

Mandatory follow-up:

  • Test-of-cure is required 3-4 weeks after treatment completion in all pregnant patients due to potential maternal and neonatal complications 1, 2, 3

Pediatric Dosing

For children ≥8 years weighing >45 kg:

  • Azithromycin 1 g orally as a single dose OR doxycycline 100 mg orally twice daily for 7 days 1, 2, 3

For children <45 kg:

  • Erythromycin base or ethylsuccinate 50 mg/kg/day orally divided into four doses daily for 14 days 1, 2, 3

Alternative Regimens (When First-Line Options Cannot Be Used)

Use only when azithromycin and doxycycline are contraindicated or not tolerated:

  • Levofloxacin 500 mg orally once daily for 7 days (88-94% cure rate vs. 97-98% for first-line agents) 1, 2, 3
  • Ofloxacin 300 mg orally twice daily for 7 days 1, 2
  • Erythromycin base 500 mg orally four times daily for 7 days 1, 2
  • Erythromycin ethylsuccinate 800 mg orally four times daily for 7 days 1, 2

Important caveats about alternatives:

  • Erythromycin is less efficacious than first-line options and has frequent gastrointestinal side effects causing poor compliance 1, 2
  • Fluoroquinolones offer no compliance advantage (require 7 days of dosing) and are more expensive than doxycycline 1

Follow-Up and Retesting

Test-of-cure (NOT routinely recommended):

  • Do NOT perform test-of-cure in non-pregnant patients treated with recommended regimens, as treatment failure rates are extremely low (0-3% in males, 0-8% in females) 2, 3
  • Test-of-cure is only indicated when therapeutic compliance is questionable, symptoms persist, or reinfection is suspected 1, 2
  • If testing is needed, wait at least 3 weeks after treatment completion, as nucleic acid amplification tests performed earlier can yield false-positives from dead organisms 1, 2

Reinfection screening (strongly recommended):

  • All women with chlamydia should be retested approximately 3 months after treatment, regardless of whether partners were reportedly treated 1, 2, 3
  • Reinfection rates reach 39% in some adolescent populations 1, 2, 3
  • Repeat infections carry elevated risk for pelvic inflammatory disease and other complications compared to initial infection 1, 2

Concurrent Gonorrhea Management

Test for gonorrhea at the initial visit in all patients diagnosed with chlamydia. 1

If gonorrhea is confirmed or prevalence exceeds 5% in the population:

  • Treat concurrently with ceftriaxone 250 mg IM single dose PLUS azithromycin 1 g orally single dose 1, 5
  • Coinfection rates are 20-40% in high-prevalence populations 1

Common Pitfalls to Avoid

  • Do NOT wait for test results before treating partners—empiric treatment is mandatory for all partners from the preceding 60 days 1
  • Do NOT perform test-of-cure in asymptomatic non-pregnant patients—this wastes resources and may yield false-positives 1, 2
  • Do NOT assume partners were treated—directly verify or use expedited partner therapy 1
  • Do NOT use fluoroquinolones or doxycycline in pregnancy—these are absolutely contraindicated 1, 2, 3
  • Do NOT retreat based on symptoms alone—require objective evidence of urethral inflammation before considering treatment failure 1

References

Guideline

Chlamydia Treatment Guidelines

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Guideline

Chlamydia Treatment Guidelines

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Chlamydia Treatment Guidelines

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Adherence to doxycycline for uncomplicated genitourinary chlamydia: A prospective observational study.

Journal of the American College of Emergency Physicians open, 2024

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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