Can cervical cancer be present despite an abnormal Pap smear and a negative high‑risk human papillomavirus (HPV) test?

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Last updated: February 20, 2026View editorial policy

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Can Cervical Cancer Be Present with Abnormal Pap and Negative HPV?

Yes, cervical cancer can exist despite a negative HPV test, though this scenario is uncommon—the 5-year risk of high-grade precancer (CIN 3+) after an HPV-negative abnormal Pap ranges from 0.48% to 1.1% depending on the cytologic abnormality, which is approximately 4 times higher than after a completely negative cotest. 1, 2

Understanding the Risk Stratification

The absolute risk varies by the specific cytologic abnormality:

  • HPV-negative ASC-US: 5-year CIN 3+ risk of 0.48–1.1%, which is significantly higher than the 0.11–0.27% risk after a negative cotest 1, 2
  • HPV-negative LSIL: Similar elevated risk profile requiring enhanced surveillance 1
  • The negative predictive value of HPV testing for HSIL is approximately 99.6%, meaning a small percentage of high-grade lesions can still be missed 3

Why This Discordance Occurs

Several biological and technical factors explain false-negative HPV results in the presence of cervical abnormalities:

  • Cervical parakeratosis/hyperkeratosis is present in 87.8% of biopsy-proven LSIL cases with concurrent negative Pap tests, and causes an 83.3% HPV-negative rate by physically blocking access to infected cells 4
  • Sampling inadequacy can result in insufficient cellular material for HPV detection, particularly when thick keratotic layers are present 4
  • Non-HPV-related lesions including adenocarcinoma in situ and rare HPV-independent cancers can produce abnormal cytology without detectable HPV 5
  • Approximately 14% of cytologically negative preparations associated with histologic HSIL contain no morphologically abnormal cells despite positive HPV, suggesting cytology has inherent sensitivity limitations 6

Recommended Management Algorithm

For Women ≥21 Years with HPV-Negative ASC-US:

The ASCCP recommends repeat cotesting (Pap + HPV) at 12 months rather than returning to routine 5-year screening 7, 1:

  • If repeat cotest shows any cytologic abnormality (ASC-US or higher) OR positive HPV: refer immediately to colposcopy 7, 1
  • If repeat cotest is negative for both: continue enhanced surveillance with cotesting every 3 years until adequate negative screening history is established 1
  • Do not return to 5-year intervals after a single negative follow-up test 1

For Women ≥21 Years with HPV-Negative LSIL:

  • Do not perform immediate colposcopy unless a visible cervical lesion is identified on examination 1
  • Repeat cotesting in 1 year 1
  • If repeat testing shows abnormality or positive HPV, proceed to colposcopy 1
  • Continue 3-year cotesting intervals until adequate negative history is achieved 1

For Women ≥30 Years:

  • The same management applies, but these women cannot discontinue screening at age 65 based on an HPV-negative abnormal result alone 1
  • Must achieve either 2 consecutive negative cotests or 3 consecutive negative Pap tests before discontinuing screening 1

Critical Clinical Pitfalls to Avoid

  • Never assume an HPV-negative result completely excludes disease when cytology is abnormal—the 4-fold increased risk compared to negative cotesting mandates enhanced surveillance 1, 2
  • Do not perform immediate colposcopy for HPV-negative ASC-US or LSIL unless there is a visible lesion, as this represents over-treatment given the low absolute risk 7, 1
  • Colposcopy has limited sensitivity for detecting all cervical lesions, so a negative colposcopic evaluation does not eliminate the need for continued surveillance 1
  • Do not revert to 5-year screening intervals after HPV-negative abnormal cytology—3-year cotesting is required until adequate negative history is documented 1
  • Be aware that thick keratotic plaques on the cervix should raise suspicion for sampling issues that could cause false-negative HPV results 4

Evidence Quality Considerations

The management recommendations are based on high-quality guidelines from ASCCP and NCCN 7, 1, supported by large prospective cohort data from Kaiser Permanente Northern California showing the elevated but manageable risk profile of HPV-negative abnormal cytology 2. The biological mechanisms explaining discordance are well-documented in pathology literature 4, 6, providing a strong rationale for the conservative but vigilant approach recommended by current guidelines.

Related Questions

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Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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